CAZyme Information

Basic Information
SpeciesSorghum bicolor
Cazyme IDSb01g003140.1
FamilyGT2
Protein PropertiesLength: 351 Molecular Weight: 39426.8 Isoelectric Point: 10.0027
ChromosomeChromosome/Scaffold: 1 Start: 2528507 End: 2533806
DescriptionNucleotide-diphospho-sugar transferases superfamily protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT2852801.6e-33
  SLIVPAYNEEHRLPEALRETLNYLKRRSTADKSFSYEVLIVDDGSTDRTSKVAFGFVKQHKIDNVRVLLLGRNHGKGEAVRKGMLHSRGELLLMLDADGA
  TKVTDLEKLEAQVHALAKKAKSRLETSTSSSQNLSDVEIAVFGSRAHLEKQALATRKWYRNFLMKGFHLVVLLTAGPGIKDTQCGFKMFTRAAARK
Full Sequence
Protein Sequence     Length: 351     Download
MAAAWPLSAV AGLLPASLSL TLLXXXXXXX XXXXXXXXXX XXXXXXXXMH SLERSAVSDA    60
FFEDPNSLKK VPCPSVFDPP EKYISLIVPA YNEEHRLPEA LRETLNYLKR RSTADKSFSY    120
EVLIVDDGST DRTSKVAFGF VKQHKIDNVR VLLLGRNHGK GEAVRKGMLH SRGELLLMLD    180
ADGATKVTDL EKLEAQVHAL AKKAKSRLET STSSSQNLSD VEIAVFGSRA HLEKQALATR    240
KWYRNFLMKG FHLVVLLTAG PGIKDTQCGF KMFTRAAARK LFTNIRLKRW CFDVELVYLC    300
KCLRIPMVEV SVNWTEIPGS KVRMTSIIHM VFELLLIKVG YGLGIWKIYS *             360
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd06442DPM1_like1.0e-2086334255+
pfam00535Glycos_transf_29.0e-2485282198+
cd04179DPM_DPG-synthase_like8.0e-5286300215+
PTZ00260PTZ002602.0e-10083348270+
cd04188DPG_synthase1.0e-10386321236+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAO18453.105035080380putative dolichyl-phosphate beta-glucosyltransferase [Oryza sativa Japonica Group]
GenBankEEC76428.105035052352hypothetical protein OsI_14108 [Oryza sativa Indica Group]
RefSeqNP_001051729.105035052352Os03g0821800 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001140935.104935049350hypothetical protein LOC100273013 [Zea mays]
RefSeqXP_002312095.105835042335predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3bcv_B0.000584182794A Chain A, Crystal Structure Of A Putative Glycosyltransferase From Bacteroides Fragilis
PDB3bcv_A0.000584182794A Chain A, Crystal Structure Of A Putative Glycosyltransferase From Bacteroides Fragilis
PDB2z87_B0.00367182369463A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp- Galnac And Udp
PDB2z87_A0.00367182369463A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp- Galnac And Udp
Metabolic Pathways
Pathway NameReactionECProtein Name
dolichyl-diphosphooligosaccharide biosynthesis2.4.1.117-RXNEC-2.4.1.117dolichyl-phosphate β-glucosyltransferase
Transmembrane Domains
StartEnd
729
Signal Peptide
Cleavage Site
19
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
JG875400261913510
HO335835240943330
HO323954235632970
CO451509248743210
CO451509343143476.4
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_011_00165.2Aquca_011_00165.3Aquca_011_00165.4Aquca_011_00165.1
Arabidopsis lyrata482983
Arabidopsis thalianaAT2G39630.2AT2G39630.1
Brachypodium distachyonBradi1g03660.1
Brassica rapaBra005029Bra000139
Carica papayaevm.model.supercontig_1.403
Capsella rubellaCarubv10023563m
Chlamydomonas reinhardtiiCre16.g652850.t1.2
Citrus clementinaCiclev10032053m
Citrus sinensisorange1.1g027065morange1.1g019818morange1.1g023346m
Cucumis sativusCucsa.010820.1Cucsa.165370.1Cucsa.165370.2Cucsa.165370.3
Eucalyptus grandisEucgr.G02933.1Eucgr.G02933.2Eucgr.G02933.3
Fragaria vescamrna26609.1-v1.0-hybrid
Glycine maxGlyma02g10150.1Glyma18g52810.2Glyma18g52810.1Glyma02g10150.3Glyma02g10150.2
Gossypium raimondiiGorai.011G260700.2Gorai.009G319400.2Gorai.009G319400.4Gorai.011G260700.3Gorai.011G260700.1
Gorai.009G319400.1Gorai.009G319400.3
Linum usitatissimumLus10005164Lus10001691Lus10023414Lus10040296
Malus domesticaMDP0000274007MDP0000272852
Manihot esculentacassava4.1_011328m
Medicago truncatulaMedtr7g026260.2Medtr7g026260.1
Mimulus guttatusmgv1a025143m
Oryza sativaLOC_Os03g60700.1LOC_Os03g60700.2
Panicum virgatumPavirv00060983mPavirv00063183m
Physcomitrella patensPp1s49_46V6.1Pp1s14_205V6.2Pp1s14_205V6.1Pp1s96_201V6.1
Phaseolus vulgarisPhvul.008G010800.1Phvul.008G010800.2
Picea abiesMA_10347707g0010MA_10428813g0010MA_159008g0490MA_158860g0090
Populus trichocarpaPotri.010G204000.4Potri.010G204000.2Potri.010G204000.1Potri.008G055700.1Potri.010G204000.3
Potri.008G055700.2
Prunus persicappa008313m
Ricinus communis30003.m000334
Setaria italicaSi036396m
Selaginella moellendorffii73379414988101926
Thellungiella halophilaThhalv10016901m
Vitis viniferaGSVIVT01016551001
Volvox carteriVocar20012273m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny