| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g004630.1 |
| Family | GT31 |
| Protein Properties | Length: 657 Molecular Weight: 73532.8 Isoelectric Point: 7.0476 |
| Chromosome | Chromosome/Scaffold: 1 Start: 3702739 End: 3707122 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 425 | 606 | 0 |
| ERMAARKTWMSAAQKSSNVVARFFVALHGRNEVNVELKKEAEFFGDIVIVPFMDSYDLVVLKTIAICEYGVHVVSARYIMKCDDDTFVRLDSVMAEVKKI QNGISLYIGNMNYHHKPLRDGKWAVTYEEWPEEDYPIYANGPGYVISSDIADSILSDFLNHKLRLFKMEDVSMGMWVERFNN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 657 Download |
| MRRSSGPGTP CRRRAIQVLV AVSLAYALAV LLLESPLVST SLPGAGASAA ASRKLHLDGA 60 WEGVGRTAPA RPGKHPHRET LSADAWWGRA RRLAGIVSGL ELRHLNSTRS GSLRKVAAEA 120 AESGARVFSG LEALATTLAS SRDSSGEEEK SKCPHSIVLS GDEFRERGRT VELPCGLTLG 180 SYITVAATPH QAHPERDPKI TMLREGEEPI MVSQFMMELQ GLKTVDGEDP PRILHFNPRL 240 RGDWSGKPVI EQNTCYRMQW GTPLRCEGWR SRADEETVDG LVKCEKWIRD DEGRSEESKT 300 SWWLNRLIGR TKTVSVDWPY PFVEDRLFVL TLTAGLEGYH VNVDGRHVTS FPYRTGFVLE 360 DATGLSLNGD LDVQSVFAGT LPTTHPSFSP QKHLEMLPSW QAPPLPDEPV EIFIGILSAG 420 NHFAERMAAR KTWMSAAQKS SNVVARFFVA LHGRNEVNVE LKKEAEFFGD IVIVPFMDSY 480 DLVVLKTIAI CEYGVHVVSA RYIMKCDDDT FVRLDSVMAE VKKIQNGISL YIGNMNYHHK 540 PLRDGKWAVT YEEWPEEDYP IYANGPGYVI SSDIADSILS DFLNHKLRLF KMEDVSMGMW 600 VERFNNTRFV KYVHSVKFCQ FGCIDDYYTA HYQSPRQMLC LWDKLQAGKA QCCNMR* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00908 | Gal-bind_lectin | 3.0e-14 | 174 | 376 | 203 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| cd00070 | GLECT | 4.0e-17 | 170 | 377 | 208 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam00337 | Gal-bind_lectin | 8.0e-21 | 169 | 376 | 208 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| pfam01762 | Galactosyl_T | 2.0e-22 | 424 | 603 | 192 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| PLN03133 | PLN03133 | 3.0e-126 | 138 | 656 | 538 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAS07235.1 | 0 | 1 | 588 | 1 | 587 | putative galactosyltransferase, 3'-partial [Oryza sativa Japonica Group] |
| GenBank | EAY92235.1 | 0 | 1 | 656 | 1 | 655 | hypothetical protein OsI_13955 [Oryza sativa Indica Group] |
| RefSeq | NP_001051614.1 | 0 | 1 | 656 | 1 | 655 | Os03g0803900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001059116.1 | 0 | 66 | 656 | 73 | 663 | Os07g0195200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002463707.1 | 0 | 1 | 656 | 1 | 656 | hypothetical protein SORBIDRAFT_01g004630 [Sorghum bicolor] |
