| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g007670.1 |
| Family | CBM43 |
| Protein Properties | Length: 169 Molecular Weight: 16915.1 Isoelectric Point: 5.6909 |
| Chromosome | Chromosome/Scaffold: 1 Start: 6589330 End: 6591674 |
| Description | plasmodesmata callose-binding protein 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 25 | 106 | 4e-32 |
| WCVCRTDLADTALQKTLDYACGGGADCKPILQNGACFAPDTVKAHCSYAVNSFYQRNNQNPQACVFSGTATLSNNDPSGNGC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 169 Download |
| MADAARLFLL VAVTAALAGR SDAAWCVCRT DLADTALQKT LDYACGGGAD CKPILQNGAC 60 FAPDTVKAHC SYAVNSFYQR NNQNPQACVF SGTATLSNND PSGNGCTYPA TPSAAATSSP 120 GVYSPPTMGP SALNDNSGAA GVLPTAAGLA TRLVILACCS LVALYLGA* 180 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 1.0e-19 | 25 | 95 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 9.0e-33 | 25 | 106 | 82 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM47584.1 | 0 | 1 | 168 | 1 | 157 | putative expressed protein [Sorghum bicolor] |
| GenBank | ACG25806.1 | 0 | 1 | 168 | 1 | 171 | glucan endo-1,3-beta-glucosidase 3 precursor [Zea mays] |
| RefSeq | NP_001150608.1 | 0 | 1 | 168 | 1 | 174 | LOC100284241 [Zea mays] |
| RefSeq | NP_001152290.1 | 0 | 1 | 168 | 1 | 172 | glucan endo-1,3-beta-glucosidase 3 [Zea mays] |
| RefSeq | XP_002463859.1 | 0 | 1 | 168 | 1 | 168 | hypothetical protein SORBIDRAFT_01g007670 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 2e-21 | 20 | 110 | 8 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
