| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g008030.1 |
| Family | GH3 |
| Protein Properties | Length: 704 Molecular Weight: 76193.9 Isoelectric Point: 9.363 |
| Chromosome | Chromosome/Scaffold: 1 Start: 6942819 End: 6947517 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 183 | 417 | 0 |
| STRLGIPMIYGIDAVHGHNNVYGATIFPHNVGLGATRDPNLVKRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDHRIVQSMTELIPGLQG DVPQNFTSGMPFAAGKNKVAACAKHFVGDGGTQNGINENNTIIDRDGLMSIHMPAYLDALRKGVSTVMISYSSWNGLKMHANHDLITRFLKGRLNFQGFT ISDWEGIDRITSPPGANYSYSVQASILAGIDMIMV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 704 Download |
| MHHLSHPLLP RASGLSPFRG IARSSHSCRR CSALPRRAAL PSVPTVFWVA QMGVGMKLLA 60 RVRRRLVPLL RRHRMALLTA PAVAALLLVF WSAAYGGDAQ GVPPYKDPKN DVEVRVKDLL 120 ARMTLAEKIG QMTQIERLVA SPQVLKDYYI GSLLSGGGSV PRKQATAAEW MAMISDFQKA 180 CLSTRLGIPM IYGIDAVHGH NNVYGATIFP HNVGLGATRD PNLVKRIGAA TALEVRATGI 240 QYAFAPCIAV CRDPRWGRCY ESYSEDHRIV QSMTELIPGL QGDVPQNFTS GMPFAAGKNK 300 VAACAKHFVG DGGTQNGINE NNTIIDRDGL MSIHMPAYLD ALRKGVSTVM ISYSSWNGLK 360 MHANHDLITR FLKGRLNFQG FTISDWEGID RITSPPGANY SYSVQASILA GIDMIMVPNN 420 YQDFITILTG HVNSGLIPMS RIDDAVTRIL RVKFTMGLFE NPMPDPSLAD QLGKQEHRDL 480 AREAVRKSLV LLKNGKPGDA PLLPLPKKAA KILVAGSHAD NLGYQCGGWT IEWQGDTGRI 540 TVGTTILDAV KAAVDPSTTV VFAENPDADF VKNGGFSYAI VAVGEHPYTE TKGDSLNLTI 600 PDPGPSTVQT VCGAVRCATV LISGRPVVIQ PFLGAMDALV AAWLPGTEGQ GITDVLFGDY 660 GFTGKLPRTW FKSVDQLPMN YGDKKYDPLF PLGFGLTTQG KGY* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03080 | PLN03080 | 6.0e-32 | 166 | 688 | 576 | + Probable beta-xylosidase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 4.0e-41 | 489 | 697 | 227 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 6.0e-72 | 92 | 697 | 681 | + beta-D-glucoside glucohydrolase; Provisional | ||
| COG1472 | BglX | 1.0e-78 | 123 | 556 | 444 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 2.0e-85 | 124 | 452 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD23382.1 | 0 | 105 | 699 | 30 | 625 | AF102868_1 beta-D-glucan exohydrolase isoenzyme ExoI [Hordeum vulgare subsp. vulgare] |
| GenBank | AAL58976.1 | 0 | 105 | 703 | 79 | 677 | AC091811_25 putative exohydrolase [Oryza sativa Japonica Group] |
| GenBank | ADC55526.1 | 0 | 105 | 699 | 7 | 602 | beta-D-glucan glucohydrolase precursor [synthetic construct] |
| RefSeq | NP_001051277.1 | 0 | 105 | 703 | 28 | 626 | Os03g0749500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001104913.1 | 0 | 96 | 703 | 22 | 632 | LOC541703 [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1x39_A | 0 | 105 | 699 | 5 | 600 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1x38_A | 0 | 105 | 699 | 5 | 600 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1lq2_A | 0 | 105 | 699 | 5 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1j8v_A | 0 | 105 | 699 | 5 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1iex_A | 0 | 105 | 699 | 5 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
