| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g008030.2 |
| Family | GH3 |
| Protein Properties | Length: 699 Molecular Weight: 75168.8 Isoelectric Point: 8.3482 |
| Chromosome | Chromosome/Scaffold: 1 Start: 6942819 End: 6947441 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 178 | 412 | 0 |
| STRLGIPMIYGIDAVHGHNNVYGATIFPHNVGLGATRDPNLVKRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDHRIVQSMTELIPGLQG DVPQNFTSGMPFAAGKNKVAACAKHFVGDGGTQNGINENNTIIDRDGLMSIHMPAYLDALRKGVSTVMISYSSWNGLKMHANHDLITRFLKGRLNFQGFT ISDWEGIDRITSPPGANYSYSVQASILAGIDMIMV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 699 Download |
| MAGAVPAPTT PHPLSAIPAA LRLLLCSFIC TLAGEHKPGC SPPPPPLLPT CCSAFLVRRR 60 LVPLLRRHRM ALLTAPAVAA LLLVFWSAAY GGDAQGVPPY KDPKNDVEVR VKDLLARMTL 120 AEKIGQMTQI ERLVASPQVL KDYYIGSLLS GGGSVPRKQA TAAEWMAMIS DFQKACLSTR 180 LGIPMIYGID AVHGHNNVYG ATIFPHNVGL GATRDPNLVK RIGAATALEV RATGIQYAFA 240 PCIAVCRDPR WGRCYESYSE DHRIVQSMTE LIPGLQGDVP QNFTSGMPFA AGKNKVAACA 300 KHFVGDGGTQ NGINENNTII DRDGLMSIHM PAYLDALRKG VSTVMISYSS WNGLKMHANH 360 DLITRFLKGR LNFQGFTISD WEGIDRITSP PGANYSYSVQ ASILAGIDMI MVPNNYQDFI 420 TILTGHVNSG LIPMSRIDDA VTRILRVKFT MGLFENPMPD PSLADQLGKQ EHRDLAREAV 480 RKSLVLLKNG KPGDAPLLPL PKKAAKILVA GSHADNLGYQ CGGWTIEWQG DTGRITVGTT 540 ILDAVKAAVD PSTTVVFAEN PDADFVKNGG FSYAIVAVGE HPYTETKGDS LNLTIPDPGP 600 STVQTVCGAV RCATVLISGR PVVIQPFLGA MDALVAAWLP GTEGQGITDV LFGDYGFTGK 660 LPRTWFKSVD QLPMNYGDKK YDPLFPLGFG LTTQGKGY* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03080 | PLN03080 | 6.0e-32 | 161 | 683 | 576 | + Probable beta-xylosidase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 2.0e-41 | 484 | 692 | 227 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 6.0e-73 | 87 | 692 | 681 | + beta-D-glucoside glucohydrolase; Provisional | ||
| COG1472 | BglX | 1.0e-79 | 118 | 551 | 444 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 4.0e-86 | 119 | 447 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD23382.1 | 0 | 100 | 694 | 30 | 625 | AF102868_1 beta-D-glucan exohydrolase isoenzyme ExoI [Hordeum vulgare subsp. vulgare] |
| GenBank | AAL58976.1 | 0 | 100 | 698 | 79 | 677 | AC091811_25 putative exohydrolase [Oryza sativa Japonica Group] |
| GenBank | ADC55526.1 | 0 | 100 | 694 | 7 | 602 | beta-D-glucan glucohydrolase precursor [synthetic construct] |
| RefSeq | NP_001051277.1 | 0 | 100 | 698 | 28 | 626 | Os03g0749500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001104913.1 | 0 | 91 | 698 | 22 | 632 | LOC541703 [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1x39_A | 0 | 100 | 694 | 5 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1x38_A | 0 | 100 | 694 | 5 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1lq2_A | 0 | 100 | 694 | 5 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1j8v_A | 0 | 100 | 694 | 5 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1iex_A | 0 | 100 | 694 | 5 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
