| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g008050.1 |
| Family | GH3 |
| Protein Properties | Length: 637 Molecular Weight: 69826.5 Isoelectric Point: 9.0876 |
| Chromosome | Chromosome/Scaffold: 1 Start: 6972348 End: 6974973 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 108 | 343 | 0 |
| LKTRLGIPIIYGIDAVHGNNDVYNATIFPHNVGLGATRDAHLVKKIGEATAHETRATGIPYTFAPCVAVCRDPRWGRCYESFSEETKLVQLMTSNMVAGL QGDVPKKHPKGVPFVGGSKKVAGCAKHFVGDGGTTRGMDENNTALSFHDLMRIHMPPYDNAVIKGISSVMISYSSWNGVKMHENKFLITETLKNKMDFRG FVITDWQAVDRITNPPHKHYYHSIKETIHAGIDMVM | |||
| Full Sequence |
|---|
| Protein Sequence Length: 637 Download |
| MTRSTAATAV ACLVLAFLLP SAASAKERVK YKDPKQSVND RVQDLLSRMT LEEKIGQMSQ 60 IERANATTEV IEKYFVGSVL SGGGSVPAEK ASASVWQKMV TKMQKAALKT RLGIPIIYGI 120 DAVHGNNDVY NATIFPHNVG LGATRDAHLV KKIGEATAHE TRATGIPYTF APCVAVCRDP 180 RWGRCYESFS EETKLVQLMT SNMVAGLQGD VPKKHPKGVP FVGGSKKVAG CAKHFVGDGG 240 TTRGMDENNT ALSFHDLMRI HMPPYDNAVI KGISSVMISY SSWNGVKMHE NKFLITETLK 300 NKMDFRGFVI TDWQAVDRIT NPPHKHYYHS IKETIHAGID MVMIPYDYPE FVADLVKQVK 360 DGQIMLDRIN DAVSRILRVK FTMGLFEDPI PDPRLTKELG AQDHRALARE AVRKSLVLLK 420 NKKKGQKDPM LPLDKKAKKI LVAGSHAHDL GSQCGGWTIK WQGETGNNLT GVGTTILEAI 480 KKAVDKKTTV DYVERPDKDD LAKSASDYEY AVVAVGEPPY AETAGDSKNL TIPSPGPEVI 540 KDVCGLVKCV VLIVSGRPLV LQPYVDYMDA LVAAWLPGTE AEGITDVLFG DYGFTGKLPR 600 TWFKSVDQLP MNYGDKHYDP LFPFGFGLTT KAAGHK* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03080 | PLN03080 | 7.0e-36 | 37 | 629 | 661 | + Probable beta-xylosidase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 2.0e-55 | 416 | 629 | 230 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| pfam00933 | Glyco_hydro_3 | 3.0e-82 | 50 | 379 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PRK15098 | PRK15098 | 3.0e-86 | 42 | 629 | 660 | + beta-D-glucoside glucohydrolase; Provisional | ||
| COG1472 | BglX | 8.0e-89 | 49 | 485 | 444 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY91867.1 | 0 | 24 | 631 | 26 | 631 | hypothetical protein OsI_13514 [Oryza sativa Indica Group] |
| RefSeq | NP_001051274.1 | 0 | 24 | 631 | 33 | 638 | Os03g0749100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001105671.1 | 0 | 24 | 633 | 20 | 629 | beta-glucanase [Zea mays] |
| RefSeq | NP_001130296.1 | 0 | 13 | 632 | 10 | 620 | exoglucanase1 [Zea mays] |
| RefSeq | XP_002466456.1 | 0 | 1 | 636 | 1 | 636 | hypothetical protein SORBIDRAFT_01g008050 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1j8v_A | 0 | 27 | 632 | 1 | 601 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1iex_A | 0 | 27 | 632 | 1 | 601 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1iew_A | 0 | 27 | 632 | 1 | 601 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1iev_A | 0 | 27 | 632 | 1 | 601 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1ieq_A | 0 | 27 | 632 | 1 | 601 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
