y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb01g008860.1 |
Family | GH9 |
Protein Properties | Length: 622 Molecular Weight: 69237.9 Isoelectric Point: 9.3778 |
Chromosome | Chromosome/Scaffold: 1 Start: 7628771 End: 7632321 |
Description | glycosyl hydrolase 9A1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 109 | 583 | 0 |
QYTQALHKALMFFNAQRSGPLPKHNGVSWRGNSCMKDGLSDSTVRRSLVGGYYDAGDAIKFNYPMAWSMTMLSWSVIEYRAKYEAIGELDHIKELIKWGT DYILKTFNSSADTIDRIVAQVGVGDTSKGGSQPNDHYCWMRPEDIDYKRPVTECHSCSDLASEMAAALAAASIVFKDSKTYSDKLVKGAKALYKFGRLQR GRYSPNGSDQAIFYNSTSYWDEFVWGGAWMYFATGNNSYLTVATAPGMAKHAGAYWFGSPNYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHN QTDNVMCSYLPLFNSFNFTKGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTPGWYCGPNFYTTEVLRKFARSQLDYILGKNPLKMSYVVGFGNKY PKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRHDGYKDVRTNYNYSEPTLAANAGLVAAL |
Full Sequence |
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Protein Sequence Length: 622 Download |
MFGRDPWGGP LEISNADSAT DDDRSRDLDR AALMRQLDET QQSWLLAGPG DQAGKKKKKY 60 VDLGCVVVDR KIFMWTVGTI LGLGVFIGFI MMIVKLVPHK RPPPPPPDQY TQALHKALMF 120 FNAQRSGPLP KHNGVSWRGN SCMKDGLSDS TVRRSLVGGY YDAGDAIKFN YPMAWSMTML 180 SWSVIEYRAK YEAIGELDHI KELIKWGTDY ILKTFNSSAD TIDRIVAQVG VGDTSKGGSQ 240 PNDHYCWMRP EDIDYKRPVT ECHSCSDLAS EMAAALAAAS IVFKDSKTYS DKLVKGAKAL 300 YKFGRLQRGR YSPNGSDQAI FYNSTSYWDE FVWGGAWMYF ATGNNSYLTV ATAPGMAKHA 360 GAYWFGSPNY GVFTWDDKLP GAQVLLSRLR LFLSPGYPYE EILRTFHNQT DNVMCSYLPL 420 FNSFNFTKGG LIQLNHGRPQ PLQYAVNAAF LASLYSDYLE AADTPGWYCG PNFYTTEVLR 480 KFARSQLDYI LGKNPLKMSY VVGFGNKYPK RPHHRGASIP HNGVKYGCKG GYKWRDTKKA 540 NPNILVGAMV AGPDRHDGYK DVRTNYNYSE PTLAANAGLV AALISISDIK TGRFGIDKNT 600 IFSAIPPMFP TPPPPPSAWK P* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02340 | PLN02340 | 4.0e-111 | 110 | 580 | 485 | + endoglucanase | ||
PLN02266 | PLN02266 | 3.0e-112 | 99 | 583 | 498 | + endoglucanase | ||
PLN02613 | PLN02613 | 4.0e-113 | 108 | 584 | 491 | + endoglucanase | ||
PLN02345 | PLN02345 | 7.0e-144 | 113 | 589 | 488 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 1.0e-163 | 110 | 583 | 480 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN28577.1 | 0 | 1 | 621 | 1 | 621 | unknown [Zea mays] |
EMBL | CBB36505.1 | 0 | 1 | 621 | 1 | 626 | Hordeum vulgare protein similar to endo-1,4-b-glucanase BAA94257 [Saccharum hybrid cultivar R570] |
RefSeq | NP_001051192.1 | 0 | 1 | 621 | 1 | 620 | Os03g0736300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151770.1 | 0 | 1 | 621 | 1 | 621 | endo-1,4-beta-glucanase Cel1 [Zea mays] |
RefSeq | XP_002463915.1 | 0 | 1 | 621 | 1 | 621 | hypothetical protein SORBIDRAFT_01g008860 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 110 | 586 | 5 | 428 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1ksc_A | 0 | 110 | 586 | 5 | 428 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1ks8_A | 0 | 110 | 586 | 5 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 106 | 583 | 2 | 437 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 106 | 583 | 2 | 437 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |