| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g011450.1 |
| Family | GT31 |
| Protein Properties | Length: 570 Molecular Weight: 62393.8 Isoelectric Point: 7.9177 |
| Chromosome | Chromosome/Scaffold: 1 Start: 10280488 End: 10284822 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 358 | 519 | 0 |
| FIGQNGRKEVNEDLIKEADFFRDIVIVPFADSYDLVVLKTVAICDYVAHVVPAKYVMKCDDDTFVGLDSVMAEVKKIPDGKSFYLGNMNYYHRPLREGKW AVSYEEWPREEYPPYADGAGYVVSSDIANFVATEMKNGRLNLFKMEDVSMGMWVGQFNLSRT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 570 Download |
| MRRQRRTAGG LRPVLLLLPF AALISVGTFS LHYADRLLSS DTGTAQRAAS PSRHQQQRRL 60 PVSTLDVRAL DAAAPAPPLH EAAARAFRSG GRLLRDALSS SPSSSAPAPP PAAAGADGAT 120 RCPASITRSG AYLHLPCGLA LGSHVTLVGA PRGGRGAAGV AQFSVELRGE GDGDAAPTIL 180 HFNPRLSGDW SRRPVIELNT RFRGQWGPAL RCEGRPSRHD EETVDGLVTC EEWSGNIGGA 240 SEELKRLQLQ NRVAGKNNRN WIHWPYPFLE EELFVLTLST GLEGYHFHVD GKHVASFPYR 300 VGFVLEDAKI FSVNGNIDIK SIVAGSLPTA HPSIAQRNLE LLTELKTPPL GKENIELFIG 360 QNGRKEVNED LIKEADFFRD IVIVPFADSY DLVVLKTVAI CDYVAHVVPA KYVMKCDDDT 420 FVGLDSVMAE VKKIPDGKSF YLGNMNYYHR PLREGKWAVS YEEWPREEYP PYADGAGYVV 480 SSDIANFVAT EMKNGRLNLF KMEDVSMGMW VGQFNLSRTG NAVAYVHSAG FCQSGCVNGY 540 LTAHYQSPAQ MVCLWEKLRR GNTWCCNAR* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01762 | Galactosyl_T | 3.0e-13 | 365 | 519 | 162 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| smart00908 | Gal-bind_lectin | 4.0e-14 | 136 | 322 | 187 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| cd00070 | GLECT | 2.0e-15 | 132 | 323 | 192 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam00337 | Gal-bind_lectin | 8.0e-19 | 135 | 322 | 188 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| PLN03133 | PLN03133 | 4.0e-79 | 121 | 569 | 506 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAT77000.1 | 0 | 1 | 569 | 1 | 618 | putative Galactosyltransferase [Oryza sativa Japonica Group] |
| GenBank | EEC75984.1 | 0 | 1 | 569 | 1 | 618 | hypothetical protein OsI_13103 [Oryza sativa Indica Group] |
| RefSeq | NP_001050960.1 | 0 | 1 | 569 | 1 | 575 | Os03g0692500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001140783.1 | 0 | 198 | 569 | 1 | 409 | hypothetical protein LOC100272858 [Zea mays] |
| RefSeq | XP_002464057.1 | 0 | 1 | 569 | 1 | 569 | hypothetical protein SORBIDRAFT_01g011450 [Sorghum bicolor] |
