| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g011560.1 |
| Family | GT8 |
| Protein Properties | Length: 589 Molecular Weight: 67916.9 Isoelectric Point: 9.2398 |
| Chromosome | Chromosome/Scaffold: 1 Start: 10387274 End: 10391855 |
| Description | galacturonosyltransferase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 247 | 561 | 0 |
| CLSMRLTIDYYLLSPEKRKFPNSENLENPDLYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLLNPPGDATIHVENVDDFKWL NSSYCPVLRQLESAAMREYYFKAGPKTLSAGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQRDLTGLWEVDLNGNVNGAVETCGESFH RFDKYLNFSNPNISQNFDPNACGWAYGMNMFDLEEWKNKDITGIYHKWQNMNENRLLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPTIERSEIDNA AVIHYNGNMKPWLEI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 589 Download |
| MAIRAGRSVL HLLTLAFLLI LAASPCLQAR VDHRKHISDW SRQPNFELQN ISSSRKDGPH 60 LLSRSEEITH RKLRGRIGVR KKMEVMQQDD EALVKLENAG IERSKAVDSA VLGKYSIWRR 120 ENENEKADSR VRLMRDQMIM ARIYSVLAKS RDKLDLYQEL LARLKESQRS LGEATADAEL 180 PKSASDRIKA MGQVLSKARD LLYDCKEITE RLRAMLQSAD EQVRSLKKQS TFLSQLAAKT 240 IPNGIHCLSM RLTIDYYLLS PEKRKFPNSE NLENPDLYHY ALFSDNVLAA SVVVNSTIMN 300 AKEPEKHVFH LVTDKLNFGA MNMWFLLNPP GDATIHVENV DDFKWLNSSY CPVLRQLESA 360 AMREYYFKAG PKTLSAGSSN LKYRNPKYLS MLNHLRFYLP QVYPKLNKIL FLDDDIVVQR 420 DLTGLWEVDL NGNVNGAVET CGESFHRFDK YLNFSNPNIS QNFDPNACGW AYGMNMFDLE 480 EWKNKDITGI YHKWQNMNEN RLLWKLGTLP PGLLTFYKLT HPLDKSWHVL GLGYNPTIER 540 SEIDNAAVIH YNGNMKPWLE IAMTKYRPYW TKYINYEHPY IHGCKISQ* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02910 | PLN02910 | 0 | 71 | 588 | 519 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| PLN02829 | PLN02829 | 0 | 88 | 586 | 504 | + Probable galacturonosyltransferase | ||
| PLN02742 | PLN02742 | 0 | 127 | 587 | 466 | + Probable galacturonosyltransferase | ||
| PLN02523 | PLN02523 | 0 | 132 | 584 | 456 | + galacturonosyltransferase | ||
| PLN02718 | PLN02718 | 0 | 128 | 586 | 462 | + Probable galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN33451.1 | 0 | 1 | 588 | 1 | 590 | unknown [Zea mays] |
| GenBank | EEC81302.1 | 0 | 13 | 588 | 7 | 588 | hypothetical protein OsI_24438 [Oryza sativa Indica Group] |
| GenBank | EEC84934.1 | 0 | 83 | 588 | 189 | 695 | hypothetical protein OsI_32147 [Oryza sativa Indica Group] |
| RefSeq | NP_001130678.1 | 0 | 1 | 588 | 1 | 588 | hypothetical protein LOC100191781 [Zea mays] |
| RefSeq | XP_002466644.1 | 0 | 1 | 588 | 1 | 588 | hypothetical protein SORBIDRAFT_01g011560 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ga8_A | 0.0007 | 385 | 558 | 75 | 252 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 1g9r_A | 0.0007 | 385 | 558 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 1ss9_A | 0.002 | 385 | 558 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
