| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g013360.1 |
| Family | GH1 |
| Protein Properties | Length: 441 Molecular Weight: 50021.5 Isoelectric Point: 6.1872 |
| Chromosome | Chromosome/Scaffold: 1 Start: 12380238 End: 12382734 |
| Description | beta glucosidase 40 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH1 | 1 | 421 | 0 |
| MGMDAYRFSIAWPRIFPNGTGEVNQAGIDHYNNLINALLAKGIEPYVTLYHWDLPQALEDKYTGWLDRQIINDYAVYAETCFKAFGDRVKHWITFNEPHT VTVQGYDSGLQAPGRCSLILHLYCKEGNSGTEPYIVAHNIILAHATVADIYMNKYKATQNGQLGISFDVIWYEPMSNSTADVEATKRAQEFQLGWFADPF FFGDYPEIMRSRVGKRLPKFTAEEAALVKGSLDFMGINHYTTFYVQDDESSVVGTLLNNTLADTGTISLPFRNGKPIGDRANSIWLYIVPGSMRSLMNYV KDRYNTPPVYITENGKKQETNGNFPVDLGMDDSNSPFISLKDAVKDDKRISYHNEYLTNLAASIREDGCDVRGYFVWSLLDNWEWTAGYTSRFGLYFVDY NNNLKRYPKNSVLWFKNLLAS | |||
| Full Sequence |
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| Protein Sequence Length: 441 Download |
| MGMDAYRFSI AWPRIFPNGT GEVNQAGIDH YNNLINALLA KGIEPYVTLY HWDLPQALED 60 KYTGWLDRQI INDYAVYAET CFKAFGDRVK HWITFNEPHT VTVQGYDSGL QAPGRCSLIL 120 HLYCKEGNSG TEPYIVAHNI ILAHATVADI YMNKYKATQN GQLGISFDVI WYEPMSNSTA 180 DVEATKRAQE FQLGWFADPF FFGDYPEIMR SRVGKRLPKF TAEEAALVKG SLDFMGINHY 240 TTFYVQDDES SVVGTLLNNT LADTGTISLP FRNGKPIGDR ANSIWLYIVP GSMRSLMNYV 300 KDRYNTPPVY ITENGKKQET NGNFPVDLGM DDSNSPFISL KDAVKDDKRI SYHNEYLTNL 360 AASIREDGCD VRGYFVWSLL DNWEWTAGYT SRFGLYFVDY NNNLKRYPKN SVLWFKNLLA 420 SSCKFGGPFR APHGMLLQTL * 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02998 | PLN02998 | 2.0e-116 | 1 | 422 | 425 | + beta-glucosidase | ||
| PLN02814 | PLN02814 | 1.0e-116 | 1 | 419 | 421 | + beta-glucosidase | ||
| COG2723 | BglB | 3.0e-120 | 1 | 424 | 428 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| TIGR03356 | BGL | 8.0e-123 | 1 | 415 | 415 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 9.0e-152 | 1 | 421 | 424 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3GNO | 0 | 1 | 421 | 82 | 488 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-Glucosidase |
| GenBank | AAK92581.1 | 0 | 1 | 422 | 103 | 514 | AC074354_15 Putative beta-glucosidase [Oryza sativa Japonica Group] |
| GenBank | EEC66726.1 | 0 | 1 | 422 | 103 | 509 | hypothetical protein OsI_33062 [Oryza sativa Indica Group] |
| RefSeq | NP_001064347.1 | 0 | 1 | 422 | 103 | 509 | Os10g0323500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002464163.1 | 0 | 1 | 440 | 1 | 440 | hypothetical protein SORBIDRAFT_01g013360 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3gnr_A | 0 | 1 | 421 | 82 | 488 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 3gnp_A | 0 | 1 | 421 | 82 | 488 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 3gno_A | 0 | 1 | 421 | 82 | 488 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 3ptq_B | 0 | 1 | 419 | 100 | 503 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 3ptq_A | 0 | 1 | 419 | 100 | 503 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CO467354 | 266 | 1 | 266 | 0 |
| EE190553 | 280 | 110 | 389 | 0 |
| CD445171 | 238 | 1 | 238 | 0 |
| EH773902 | 275 | 1 | 275 | 0 |
| EL897462 | 300 | 77 | 376 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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