y
Basic Information | |
---|---|
Species | Sorghum bicolor |
Cazyme ID | Sb01g017580.1 |
Family | AA1 |
Protein Properties | Length: 600 Molecular Weight: 66343.7 Isoelectric Point: 8.3428 |
Chromosome | Chromosome/Scaffold: 1 Start: 18134026 End: 18139393 |
Description | Cupredoxin superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA1 | 47 | 517 | 0 |
QVIGINGKFPGPVVNVSTNWNVVVNVLNDLDEPLLITWNGIQHRKNCWQDGVLGTNCPIPSGWNWTYEFQVKDQIGSFFYFPSTGLQRAAGGFGGIVVNN RDVIAVPFGRPDGDITIFIGDWYNKNHTDLRKMLDKGNDLGMPDGVLINGKGPYRYNHSLVPAGIEYETFNVHPGRTYRIRVHNVGTSTSLNFRIQGHNM VLVETEGSYTSQQNYTNLDVHVGQSYSFLVTTDQNASSDYYVVASARQVNESLWRRVTGVAVLRYSNSRAPASGPLPDPPQDQNDRTFSMNQARSVRWNL SAGAARPNPQGSFRYSSINVTQAYLLRSTAPVSIDGRRRATLNGLSYAPPETPLRLADAYGVKGVYTLDFPERPLNKGAPRIARSVINGTYRGFMELIFQ NNDTRMQSYHMDGYAFFVVGMDYGEWTEDSRGTYNKGDGVARSTIQVYPGAWAAVLVSLDNVGVWNVRSEN |
Full Sequence |
---|
Protein Sequence Length: 600 Download |
MQQRLLALVA AAALLLALRP ALATDPYAFF DWDVSYVTEA PLGVKQQVIG INGKFPGPVV 60 NVSTNWNVVV NVLNDLDEPL LITWNGIQHR KNCWQDGVLG TNCPIPSGWN WTYEFQVKDQ 120 IGSFFYFPST GLQRAAGGFG GIVVNNRDVI AVPFGRPDGD ITIFIGDWYN KNHTDLRKML 180 DKGNDLGMPD GVLINGKGPY RYNHSLVPAG IEYETFNVHP GRTYRIRVHN VGTSTSLNFR 240 IQGHNMVLVE TEGSYTSQQN YTNLDVHVGQ SYSFLVTTDQ NASSDYYVVA SARQVNESLW 300 RRVTGVAVLR YSNSRAPASG PLPDPPQDQN DRTFSMNQAR SVRWNLSAGA ARPNPQGSFR 360 YSSINVTQAY LLRSTAPVSI DGRRRATLNG LSYAPPETPL RLADAYGVKG VYTLDFPERP 420 LNKGAPRIAR SVINGTYRGF MELIFQNNDT RMQSYHMDGY AFFVVGMDYG EWTEDSRGTY 480 NKGDGVARST IQVYPGAWAA VLVSLDNVGV WNVRSENLDS WYLGQEVYVR VVNPEDTGNK 540 TEMGIPDNAL YCGQLHKYQK EQTPHHKMGV SAVAPSSLSL ARRLVASALL VAGSFVLAP* 600 660 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02991 | PLN02991 | 3.0e-180 | 25 | 554 | 531 | + oxidoreductase | ||
PLN00044 | PLN00044 | 0 | 25 | 563 | 542 | + multi-copper oxidase-related protein; Provisional | ||
PLN02354 | PLN02354 | 0 | 25 | 553 | 532 | + copper ion binding / oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 26 | 555 | 539 | + copper ion binding / pectinesterase | ||
PLN02835 | PLN02835 | 0 | 25 | 554 | 530 | + oxidoreductase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF78692.1 | 0 | 19 | 599 | 18 | 602 | unknown [Zea mays] |
GenBank | EEC67281.1 | 0 | 20 | 571 | 22 | 582 | hypothetical protein OsI_34261 [Oryza sativa Indica Group] |
GenBank | EEE51243.1 | 0 | 20 | 571 | 22 | 549 | hypothetical protein OsJ_32106 [Oryza sativa Japonica Group] |
RefSeq | NP_001105872.1 | 0 | 19 | 599 | 18 | 602 | LOC732784 [Zea mays] |
RefSeq | XP_002466968.1 | 0 | 1 | 599 | 1 | 599 | hypothetical protein SORBIDRAFT_01g017580 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 30 | 553 | 6 | 539 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 1asq_A | 0 | 30 | 553 | 6 | 539 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 1asp_B | 0 | 30 | 553 | 6 | 539 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 1asp_A | 0 | 30 | 553 | 6 | 539 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 1aso_B | 0 | 30 | 553 | 6 | 539 | A Chain A, The Structure Of Soybean Peroxidase |