| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g018400.1 |
| Family | GH27 |
| Protein Properties | Length: 427 Molecular Weight: 46959.4 Isoelectric Point: 8.0554 |
| Chromosome | Chromosome/Scaffold: 1 Start: 19132571 End: 19139966 |
| Description | alpha-galactosidase 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH27 | 32 | 166 | 1e-34 |
| RVPAVGNWTEELRGAATTRRARQRHGWRSRRRTFENGLGRTPQMGWNSWNHFGCGINENLIKQTADALVNTGLAKLGYEYVNIDDCWAESDRDYQGNFVA HRQNFPSGIKALADYVHAKGLKLGIYSDAGTRTCS | |||
| GH27 | 169 | 345 | 0 |
| MPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKNIFFSLCEWGRENPATWAGSMGNSWRTTDDIADNWGSMTSRADQNDRWA SYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAKAPLLIGCDVRSMSQQTKDILSNSEVIAVNQDSLGVQGKKV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 427 Download |
| MARAPSWSSP LVLVLIIVAT AVAAVTASEA IRVPAVGNWT EELRGAATTR RARQRHGWRS 60 RRRTFENGLG RTPQMGWNSW NHFGCGINEN LIKQTADALV NTGLAKLGYE YVNIDDCWAE 120 SDRDYQGNFV AHRQNFPSGI KALADYVHAK GLKLGIYSDA GTRTCSQKMP GSLDHEEQDV 180 KTFSSWGIDY LKYDNCNDAG RSVMERYTKM SNAMKTYGKN IFFSLCEWGR ENPATWAGSM 240 GNSWRTTDDI ADNWGSMTSR ADQNDRWASY AGPGGWNDPD MLEVGNGGMS EAEYRSHFSI 300 WALAKAPLLI GCDVRSMSQQ TKDILSNSEV IAVNQDSLGV QGKKVQSNNG LEVWAGPLSN 360 NRKAVVLWNR QGYQATITAQ WSSIGLASST AVTARDLWAH SSFSAQGQLS ASVAPHDCKM 420 YVLTPN* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03231 | PLN03231 | 7.0e-22 | 73 | 339 | 352 | + putative alpha-galactosidase; Provisional | ||
| pfam02065 | Melibiase | 1.0e-27 | 56 | 327 | 345 | + Melibiase. | ||
| PLN02808 | PLN02808 | 0 | 60 | 425 | 367 | + alpha-galactosidase | ||
| PLN02229 | PLN02229 | 0 | 62 | 425 | 369 | + alpha-galactosidase | ||
| PLN02692 | PLN02692 | 0 | 61 | 425 | 367 | + alpha-galactosidase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1UAS | 0 | 65 | 426 | 1 | 362 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
| GenBank | ACF80887.1 | 0 | 1 | 426 | 1 | 423 | unknown [Zea mays] |
| RefSeq | NP_001142381.1 | 0 | 1 | 426 | 1 | 423 | hypothetical protein LOC100274554 [Zea mays] |
| Swiss-Prot | Q9FXT4 | 0 | 65 | 426 | 56 | 417 | AGAL_ORYSJ RecName: Full=Alpha-galactosidase; AltName: Full=Alpha-D-galactoside galactohydrolase; AltName: Full=Melibiase; Flags: Precursor |
| RefSeq | XP_002467020.1 | 0 | 32 | 426 | 32 | 426 | hypothetical protein SORBIDRAFT_01g018400 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1uas_A | 0 | 65 | 426 | 1 | 362 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
| PDB | 3a5v_A | 0 | 67 | 420 | 3 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| PDB | 1ktc_A | 0 | 65 | 426 | 1 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| PDB | 1ktb_A | 0 | 65 | 426 | 1 | 387 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
| PDB | 3s5z_B | 0 | 65 | 371 | 1 | 326 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| melibiose degradation | ALPHAGALACTOSID-RXN | EC-3.2.1.22 | α-galactosidase |
| stachyose degradation | RXN-11501 | EC-3.2.1.22 | α-galactosidase |
