| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g018410.1 |
| Family | GH27 |
| Protein Properties | Length: 410 Molecular Weight: 44673.5 Isoelectric Point: 5.3977 |
| Chromosome | Chromosome/Scaffold: 1 Start: 19149396 End: 19152297 |
| Description | alpha-galactosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH27 | 143 | 241 | 1.1e-31 |
| KVQPGSLGHEEQDAKTFAAWGVDYLKYDNCNNGDLKPLERYPEMSRALMKVGRPIYFSLCEWGDMHPAKWGAAYGNSWRTTNDIADTWDSMIATADQNE | |||
| GH27 | 29 | 142 | 3e-34 |
| VQVEEAHRRSMLANGLGSAPPMGWNSWNHFQCDGNGEVVIRETADALVSTGLAALGYRYVNIDDCWAEPKRDAKGNLVANTKTFPQGIKALADYVHSKGL KLGIYSDAGFQTCA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 410 Download |
| MAGGGGSSPA RLALLLMAVA VVGGGGKVVQ VEEAHRRSML ANGLGSAPPM GWNSWNHFQC 60 DGNGEVVIRE TADALVSTGL AALGYRYVNI DDCWAEPKRD AKGNLVANTK TFPQGIKALA 120 DYVHSKGLKL GIYSDAGFQT CAKVQPGSLG HEEQDAKTFA AWGVDYLKYD NCNNGDLKPL 180 ERYPEMSRAL MKVGRPIYFS LCEWGDMHPA KWGAAYGNSW RTTNDIADTW DSMIATADQN 240 EVWAEYARPG GWNDPDMLEV GNGGMTNSEY VVHFSLWAIS KAPLIIGCDV RHMSQETYDI 300 LANKEVIAVN QDPLGVPGKK VRMEGSSEIW AAPLSEYRTA VVLLNRHAKD QATITAHWDD 360 IGLPAGTPVE ATDLWLHETV DATFTDTMSF DVAPHSCRMF VLKPNIHIR* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02065 | Melibiase | 7.0e-22 | 35 | 205 | 216 | + Melibiase. | ||
| PLN03231 | PLN03231 | 1.0e-25 | 48 | 315 | 354 | + putative alpha-galactosidase; Provisional | ||
| PLN02229 | PLN02229 | 1.0e-175 | 37 | 404 | 371 | + alpha-galactosidase | ||
| PLN02692 | PLN02692 | 0 | 33 | 404 | 372 | + alpha-galactosidase | ||
| PLN02808 | PLN02808 | 0 | 32 | 404 | 373 | + alpha-galactosidase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG13536.1 | 0 | 26 | 409 | 25 | 411 | AC023240_9 putative alpha-galactosidase [Oryza sativa Japonica Group] |
| GenBank | ACF78913.1 | 0 | 27 | 409 | 32 | 414 | unknown [Zea mays] |
| EMBL | CAF34023.1 | 0 | 32 | 404 | 31 | 403 | alpha-galactosidase 1 [Pisum sativum] |
| RefSeq | NP_001147362.1 | 0 | 30 | 409 | 33 | 412 | alpha-galactosidase [Zea mays] |
| RefSeq | XP_002467021.1 | 0 | 1 | 409 | 1 | 409 | hypothetical protein SORBIDRAFT_01g018410 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1uas_A | 0 | 40 | 405 | 1 | 362 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
| PDB | 3a5v_A | 0 | 42 | 400 | 3 | 388 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| PDB | 1ktc_A | 0 | 40 | 405 | 1 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| PDB | 1ktb_A | 0 | 40 | 405 | 1 | 387 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
| PDB | 3s5z_B | 0 | 40 | 347 | 1 | 326 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| ajugose biosynthesis II (galactinol-independent) | RXN-8285 | EC-2.4.1 | ajugose synthase |
| ajugose biosynthesis II (galactinol-independent) | RXN-8286 | EC-2.4.1 | verbascose synthase |
| ajugose biosynthesis II (galactinol-independent) | RXN-8287 | EC-2.4.1 | stachyose synthase |
| melibiose degradation | ALPHAGALACTOSID-RXN | EC-3.2.1.22 | α-galactosidase |
| stachyose degradation | RXN-11501 | EC-3.2.1.22 | α-galactosidase |
