| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g020080.1 |
| Family | GT47 |
| Protein Properties | Length: 490 Molecular Weight: 54293.2 Isoelectric Point: 9.1497 |
| Chromosome | Chromosome/Scaffold: 1 Start: 22082875 End: 22084344 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 87 | 432 | 0 |
| CAGRYIYVYRLPPRFNDDIVRGCRALRPWMDMCPYMANCGLGRPLRDEGGGGGGVFPGRGWYATDQFMLDVIFRCRMRRYECLTGDPARASAVFVPAYAS LDGGRYLWNSTATRDALALDLVAWLARRPEWRATGGRDHFLVAGRTAWDFLRKTDGDDDWGTKLLNIPAVRNMTALVLEMDPWNPSSHLAVPYPTNFHPA TAADVRAWQAKARAFKRRWLFSFVGAARPGSNKTVRAEILQQCGASSRCGMFRCNKGSQCEAAPGAMMRVLESSSFCLQPRGDTATRRSTFDAVLAGCIP VFFHPDSAYTQYAEHIPAEPGRWSVLIMHTDVTDRNVSIEETLAKI | |||
| Full Sequence |
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| Protein Sequence Length: 490 Download |
| MKPTTALELS FQNDGADKPD GGSTGGVLWP SRICYLVAVA TTLWAVASIL FPPSAFPLPP 60 LMSSVTVVNQ HPPPSEDDRT NVTADRCAGR YIYVYRLPPR FNDDIVRGCR ALRPWMDMCP 120 YMANCGLGRP LRDEGGGGGG VFPGRGWYAT DQFMLDVIFR CRMRRYECLT GDPARASAVF 180 VPAYASLDGG RYLWNSTATR DALALDLVAW LARRPEWRAT GGRDHFLVAG RTAWDFLRKT 240 DGDDDWGTKL LNIPAVRNMT ALVLEMDPWN PSSHLAVPYP TNFHPATAAD VRAWQAKARA 300 FKRRWLFSFV GAARPGSNKT VRAEILQQCG ASSRCGMFRC NKGSQCEAAP GAMMRVLESS 360 SFCLQPRGDT ATRRSTFDAV LAGCIPVFFH PDSAYTQYAE HIPAEPGRWS VLIMHTDVTD 420 RNVSIEETLA KIPPAAVKAM RKEVIRLIPR FVYADPRSPR VDFKDAFDIA VDVVLHRVAK 480 RRRGDVDGR* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 1.0e-53 | 86 | 432 | 355 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK54285.1 | 0 | 85 | 472 | 64 | 450 | AC034258_3 hypothetical protein [Oryza sativa Japonica Group] |
| GenBank | ACY08857.1 | 0 | 80 | 489 | 150 | 555 | xyloglucan galactosyltransferase [Eucalyptus grandis] |
| DDBJ | BAH94918.1 | 0 | 85 | 472 | 95 | 481 | Os10g0459300 [Oryza sativa Japonica Group] |
| RefSeq | NP_001150032.1 | 0 | 82 | 486 | 53 | 458 | xyloglucan galactosyltransferase KATAMARI 1 [Zea mays] |
| RefSeq | XP_002464524.1 | 0 | 1 | 489 | 1 | 489 | hypothetical protein SORBIDRAFT_01g020080 [Sorghum bicolor] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CF668912 | 268 | 215 | 482 | 0 |
| EE075461 | 235 | 215 | 449 | 0 |
| JG636298 | 265 | 162 | 425 | 0 |
| EL456596 | 258 | 147 | 403 | 0 |
| CX667961 | 256 | 233 | 488 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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