| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g021290.2 |
| Family | AA6 |
| Protein Properties | Length: 256 Molecular Weight: 26520.1 Isoelectric Point: 7.1627 |
| Chromosome | Chromosome/Scaffold: 1 Start: 24800907 End: 24803814 |
| Description | Quinone reductase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA6 | 55 | 250 | 0 |
| LYIVFYSMYGHVESLAQRAAAGAGAVDGLEAVLRRVPETLPPEVLEKMQAPPKDPAVPVIASAAELQEADGVLFGFPTRYGSMAAQMKAFFDSTGSLWEA QKLAGKPAGFFVSTGTQGGGQETTAWTAITQLAHHGMLFVPIGYTFGSGMFNMDDIRGGSPYGAGVFAGDGSRQPSETELALAEHQGKYMASIVKK | |||
| Full Sequence |
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| Protein Sequence Length: 256 Download |
| MGKGGGCVPS KKRQPPAAAP SSSSAEAAVP REAPEEELAK AASPTPAAAG RKLRLYIVFY 60 SMYGHVESLA QRAAAGAGAV DGLEAVLRRV PETLPPEVLE KMQAPPKDPA VPVIASAAEL 120 QEADGVLFGF PTRYGSMAAQ MKAFFDSTGS LWEAQKLAGK PAGFFVSTGT QGGGQETTAW 180 TAITQLAHHG MLFVPIGYTF GSGMFNMDDI RGGSPYGAGV FAGDGSRQPS ETELALAEHQ 240 GKYMASIVKK LAHHA* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00258 | Flavodoxin_1 | 5.0e-6 | 57 | 190 | 146 | + Flavodoxin. | ||
| pfam03358 | FMN_red | 6.0e-12 | 82 | 198 | 117 | + NADPH-dependent FMN reductase. | ||
| COG0655 | WrbA | 3.0e-32 | 51 | 251 | 208 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
| TIGR01755 | flav_wrbA | 2.0e-57 | 54 | 251 | 199 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
| PRK03767 | PRK03767 | 6.0e-70 | 54 | 252 | 200 | + NAD(P)H:quinone oxidoreductase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0010181 | FMN binding |
| GO:0016491 | oxidoreductase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC67018.1 | 0 | 1 | 253 | 1 | 249 | hypothetical protein OsI_33738 [Oryza sativa Indica Group] |
| RefSeq | NP_001147306.1 | 0 | 1 | 255 | 1 | 248 | flavoprotein wrbA [Zea mays] |
| RefSeq | XP_002273030.1 | 0 | 1 | 253 | 1 | 255 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002280986.1 | 0 | 1 | 253 | 1 | 250 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310794.1 | 0 | 1 | 253 | 1 | 253 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3b6m_B | 0 | 54 | 251 | 3 | 196 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3b6m_A | 0 | 54 | 251 | 3 | 196 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3b6k_B | 0 | 54 | 251 | 3 | 196 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3b6k_A | 0 | 54 | 251 | 3 | 196 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3b6j_B | 0 | 54 | 251 | 3 | 196 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FL933519 | 257 | 1 | 254 | 0 |
| CN126106 | 177 | 80 | 256 | 0 |
| CK209956 | 253 | 1 | 253 | 0 |
| JG479535 | 266 | 1 | 251 | 0 |
| HS253613 | 203 | 52 | 254 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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