| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g024390.1 |
| Family | GH5 |
| Protein Properties | Length: 517 Molecular Weight: 57332.2 Isoelectric Point: 5.4302 |
| Chromosome | Chromosome/Scaffold: 1 Start: 38823148 End: 38827650 |
| Description | |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 225 | 503 | 2.49992e-42 |
| QVLRNHWSTYINESDFSFVASSGLNAVRIPVGWWIASDPYPPHPFVGGSLQALDNAFSWAEKYKLGVIVDLHAAPGSQNPFEHSATRDGSQEWGTTDANI AQTVQVIDFLASRYASSPSLLAVELLNEPLAPGATLSSLTKYYQEGYNAVRRHTSAAYVIMSNRLSADATELLQFAGGFSGAVLDVHYYNLFSSVFNSLT VEQNIDFVRNNRSTDIATVTNQNGRPLTFVGEWVAEWDVQGANKTDYQRFAQVQQDVYGRATFGWSYWTLKNVNNHWSM | |||
| Full Sequence |
|---|
| Protein Sequence Length: 517 Download |
| MTSAETHLLC RVRLALLLLL VCSWWLLPRS DARRTLVAPG LPIRAVNLGG WLLTEGWILP 60 SLFDDIPNKD LLDGTQLQFK SVTQNRYLVA DQGGGAAILA DRVQASGWET FKLWRINETT 120 FNLRVFGNQF VGVNSTAGVV ATANTPGPSE TFQLVRWNSD KSRVRIRAPN GLFLQAKTME 180 SVTADHKEDT DWGDDDPSVF LTNNVGGLQG EYQICNGYGI TEATQVLRNH WSTYINESDF 240 SFVASSGLNA VRIPVGWWIA SDPYPPHPFV GGSLQALDNA FSWAEKYKLG VIVDLHAAPG 300 SQNPFEHSAT RDGSQEWGTT DANIAQTVQV IDFLASRYAS SPSLLAVELL NEPLAPGATL 360 SSLTKYYQEG YNAVRRHTSA AYVIMSNRLS ADATELLQFA GGFSGAVLDV HYYNLFSSVF 420 NSLTVEQNID FVRNNRSTDI ATVTNQNGRP LTFVGEWVAE WDVQGANKTD YQRFAQVQQD 480 VYGRATFGWS YWTLKNVNNH WSMQWMIQNG YISLKS* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00257 | Fascin | 3.0e-6 | 75 | 193 | 122 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 1.0e-13 | 215 | 496 | 288 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 9.0e-27 | 199 | 511 | 353 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEE50844.1 | 0 | 35 | 514 | 416 | 894 | hypothetical protein OsJ_31274 [Oryza sativa Japonica Group] |
| GenBank | EEE50844.1 | 0 | 42 | 515 | 903 | 1377 | hypothetical protein OsJ_31274 [Oryza sativa Japonica Group] |
| RefSeq | NP_001064458.1 | 0 | 22 | 516 | 13 | 510 | Os10g0370500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002440848.1 | 0 | 39 | 515 | 60 | 538 | hypothetical protein SORBIDRAFT_09g008170 [Sorghum bicolor] |
| RefSeq | XP_002464704.1 | 0 | 1 | 516 | 1 | 516 | hypothetical protein SORBIDRAFT_01g024390 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1eqp_A | 4e-36 | 211 | 510 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1eqc_A | 6e-36 | 211 | 510 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1cz1_A | 6e-36 | 211 | 510 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
