| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g035180.1 |
| Family | AA1 |
| Protein Properties | Length: 591 Molecular Weight: 65399.9 Isoelectric Point: 6.0033 |
| Chromosome | Chromosome/Scaffold: 1 Start: 58710308 End: 58713805 |
| Description | SKU5 similar 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 47 | 514 | 0 |
| KVIGINGQFPGPPLNVTTNWNVVVNVRNALDEPLLLTWNGVQQRKTAWQDGVLGTNCAIPAGWNWTYTFQVKDQVGSFFYFPSTPLHRAAGGYGAITINN RDVIPIPFGFPDGDITLFIGDWYNRGHRELRRALDGGTLLGAPDGVLVNGFGPYQYNQSVVPPGIVYERINVEPGKTYRFRVHNVGVSTSLNFRIQNHNL LLVETEGSYTSQQNYTNLDIHVSQSYSFLVTMDQNASTDYYVVASARFVDAAVVDKLTGVAILHYSNSQGPASGPLPDPPNDQYDTAFSINQARSIRWNV TASGARPNPQGSFHYGDITVTDVYLLQSRAPELIDGKLRSTLNEISYIAPSTPLVLAQIFNVPGVFKLDFPNHPMNRLPKVDTSIINGTYKGFMEIIFQN NATNVQSYHLDGYAFFVVGMDYGLWTENSRGTYNKWDGVARSTIQVFPGAWTAILVFLDNAGIWNLRV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 591 Download |
| MPPLLLLLLL AAALALAPAP ARSGDPYAYY DWEVSYVSAQ PLGVKQKVIG INGQFPGPPL 60 NVTTNWNVVV NVRNALDEPL LLTWNGVQQR KTAWQDGVLG TNCAIPAGWN WTYTFQVKDQ 120 VGSFFYFPST PLHRAAGGYG AITINNRDVI PIPFGFPDGD ITLFIGDWYN RGHRELRRAL 180 DGGTLLGAPD GVLVNGFGPY QYNQSVVPPG IVYERINVEP GKTYRFRVHN VGVSTSLNFR 240 IQNHNLLLVE TEGSYTSQQN YTNLDIHVSQ SYSFLVTMDQ NASTDYYVVA SARFVDAAVV 300 DKLTGVAILH YSNSQGPASG PLPDPPNDQY DTAFSINQAR SIRWNVTASG ARPNPQGSFH 360 YGDITVTDVY LLQSRAPELI DGKLRSTLNE ISYIAPSTPL VLAQIFNVPG VFKLDFPNHP 420 MNRLPKVDTS IINGTYKGFM EIIFQNNATN VQSYHLDGYA FFVVGMDYGL WTENSRGTYN 480 KWDGVARSTI QVFPGAWTAI LVFLDNAGIW NLRVQNLDTW YLGQEVYINV VNPEDNSSTI 540 PDNAIFCGAL SSLQKEQSHR FQYSEATPVP LWGKTVSLLV LLACFALWSR * 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02792 | PLN02792 | 1.0e-172 | 22 | 552 | 538 | + oxidoreductase | ||
| PLN00044 | PLN00044 | 0 | 22 | 588 | 575 | + multi-copper oxidase-related protein; Provisional | ||
| PLN02354 | PLN02354 | 0 | 22 | 559 | 547 | + copper ion binding / oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 25 | 548 | 528 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 26 | 551 | 539 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI35585.1 | 0 | 21 | 586 | 23 | 590 | unnamed protein product [Vitis vinifera] |
| GenBank | EEE53691.1 | 0 | 21 | 588 | 24 | 569 | hypothetical protein OsJ_00004 [Oryza sativa Japonica Group] |
| RefSeq | NP_001041735.1 | 0 | 21 | 588 | 24 | 593 | Os01g0100400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002465266.1 | 0 | 22 | 590 | 22 | 590 | hypothetical protein SORBIDRAFT_01g035180 [Sorghum bicolor] |
| RefSeq | XP_002527262.1 | 0 | 4 | 571 | 5 | 572 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 29 | 552 | 5 | 543 | A Chain A, Cpgh89 (E483q, E601q), From Clostridium Perfringens, In Complex With Its Substrate Glcnac-Alpha-1,4-Galactose |
| PDB | 1asq_A | 0 | 29 | 552 | 5 | 543 | A Chain A, Cpgh89 (E483q, E601q), From Clostridium Perfringens, In Complex With Its Substrate Glcnac-Alpha-1,4-Galactose |
| PDB | 1asp_B | 0 | 29 | 552 | 5 | 543 | A Chain A, Cpgh89 (E483q, E601q), From Clostridium Perfringens, In Complex With Its Substrate Glcnac-Alpha-1,4-Galactose |
| PDB | 1asp_A | 0 | 29 | 552 | 5 | 543 | A Chain A, Cpgh89 (E483q, E601q), From Clostridium Perfringens, In Complex With Its Substrate Glcnac-Alpha-1,4-Galactose |
| PDB | 1aso_B | 0 | 29 | 552 | 5 | 543 | A Chain A, Cpgh89 (E483q, E601q), From Clostridium Perfringens, In Complex With Its Substrate Glcnac-Alpha-1,4-Galactose |
