| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g035890.1 |
| Family | GT4 |
| Protein Properties | Length: 810 Molecular Weight: 92285.6 Isoelectric Point: 6.844 |
| Chromosome | Chromosome/Scaffold: 1 Start: 59518956 End: 59526539 |
| Description | sucrose synthase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 566 | 734 | 0 |
| DDRSKPILFSMARLDRVKNITGLVEAFAKCTKLRELVNLVVVAGYNDVKKSKDREEIAEIEKMHELIKTYNLFGQFRWISAQTNRARNGELYRYIADTHG AFVQPAFYEAFGLTVVEAMTCGLPTFATLHGGPAEIIEHGISGFHIDPYHPEQAANLMADFFERCKQDP | |||
| Full Sequence |
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| Protein Sequence Length: 810 Download |
| MSAPKLDRNA SIRDRVEDTL HAHRNELVAL LSKYVNKGKG ILQPHHILDA LDEVQGSGVR 60 ALAEGPFLDV LRSAQEAIVL PPFVAIAVRP RPGVWEYVRV NVHELSVEQL TVSEYLRFKE 120 DLVDGQHNDP YILELDFEPF NASVPRPNRS SSIGNGVQFL NRHLSSIMFR NRDCLEPLLD 180 FLRGHRHKGH VMMLNDRVQS LGRLQSVLTK AEEYLSKLPA ETPYAQFAYK FQEWGLEKGW 240 GDTAEHVLEM VHLLLDIIQA PDPSTLEKFL GRIPMIFNVV VVSPHGYFGQ ANVLGLPDTG 300 GQIVYILDQV RALENEMVLR LKKQGLDFSP KILIVTRLIP DAKGTSCNQR LERISGTQHT 360 YILRVPFRNE NGILKKWISR FDVWPYLETF AEDAAGEIAA ELQGTPDFII GNYSDGNLVA 420 SLLSYKMGIT QCNIAHALEK TKYPDSDIYW KKFDEKYHFS CQFTADIIAM NNADFIITST 480 YQEIAGSKNT VGQYESHTAF TLPGLYRVVH GIDVFDPKFN IVSPGADMSI YFPHTEKAKR 540 LTSLHGSIEN LLYDPEQNDQ HIGHLDDRSK PILFSMARLD RVKNITGLVE AFAKCTKLRE 600 LVNLVVVAGY NDVKKSKDRE EIAEIEKMHE LIKTYNLFGQ FRWISAQTNR ARNGELYRYI 660 ADTHGAFVQP AFYEAFGLTV VEAMTCGLPT FATLHGGPAE IIEHGISGFH IDPYHPEQAA 720 NLMADFFERC KQDPNHWVKI SEAGLKRIYE KYTWKIYSER LMTLAGVYGF WKYVSKLERR 780 ETRRYLEMFY ILKFRELAKT VPLAIDQPQ* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02472 | sucr_P_syn_N | 1.0e-61 | 279 | 765 | 496 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
| cd03800 | GT1_Sucrose_synthase | 2.0e-129 | 278 | 763 | 486 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
| PLN00142 | PLN00142 | 0 | 1 | 809 | 811 | + sucrose synthase | ||
| TIGR02470 | sucr_synth | 0 | 24 | 804 | 784 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| pfam00862 | Sucrose_synth | 0 | 8 | 553 | 548 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005985 | sucrose metabolic process |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL27096.1 | 0 | 14 | 809 | 1 | 796 | sucrose synthase [Zea mays] |
| EMBL | CAZ65725.1 | 0 | 1 | 807 | 1 | 807 | sucrose synthase [Hordeum vulgare subsp. vulgare] |
| RefSeq | NP_001050064.1 | 0 | 1 | 807 | 1 | 807 | Os03g0340500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001105194.1 | 0 | 1 | 809 | 1 | 809 | sucrose synthase2 [Zea mays] |
| RefSeq | XP_002465303.1 | 0 | 1 | 809 | 1 | 809 | hypothetical protein SORBIDRAFT_01g035890 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s29_H | 0 | 6 | 806 | 8 | 807 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 3s29_G | 0 | 6 | 806 | 8 | 807 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 3s29_F | 0 | 6 | 806 | 8 | 807 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 3s29_E | 0 | 6 | 806 | 8 | 807 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 3s29_D | 0 | 6 | 806 | 8 | 807 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| galactose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| sucrose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| UDP-glucose biosynthesis (from sucrose) | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO794519 | 806 | 1 | 806 | 0 |
| BU103683 | 802 | 6 | 806 | 0 |
| CX109054 | 607 | 101 | 707 | 0 |
| HO778590 | 270 | 271 | 540 | 0 |
| HO778590 | 275 | 532 | 806 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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