| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g036430.1 |
| Family | GT8 |
| Protein Properties | Length: 629 Molecular Weight: 72084.6 Isoelectric Point: 7.998 |
| Chromosome | Chromosome/Scaffold: 1 Start: 60037224 End: 60042247 |
| Description | galacturonosyltransferase 7 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 298 | 600 | 0 |
| CLNMRLTVEYFKSMPLDPNDSSAHKFNIPDNRHYVILSKNVLAASVVINSTVSSSEDTENVVFHVLTDAQNFYAMKHWFARNSYRESAVNVINYEQIIFE NFPEFGTQQLYLPEEFRVFISSLERPTEKSRMEYLSVFSHSHFFLAEIFKDLKKVIVLDDDVVVQRDISFLWNLDMGDKVNGAVRFCGLKLGQLKNLLGR TMYDQQSCAWMSGVNVIDLDKWRDHNVTENYLQLLRKFGNNDDEASLRASALPISLLSFQHLLYPLDERLTLSGLGYDYGIKEEVAQSSASLHYNGNMKP WLE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 629 Download |
| MKATAPPAKR RRGPRLAVLA LVFCSLLVPI AFLFNRFPAV YVTDERPQQE IDLPSSRKAF 60 ESGGSVNEDV SKKTPGSSSV SHRNIDSDPS IDSSKPKAIV LPPPKIEQVV LPPPKVEPKP 120 EVKPVPVPVH QNPKINPEKI KRPPRVQSAD EVEKAKACQL EFGSYCLWSI EHKEVMIDTI 180 VKRLKDQLFV ARSYYPSIAK LKGKETLTRE LKQNIQEHER VLSESIVDAD LPSFIKMKIE 240 RMDQSIARAK SCTVDCNNVD RKLRQILHMT EDEAHFHMKQ SAYLYNLGVH TMPKSHHCLN 300 MRLTVEYFKS MPLDPNDSSA HKFNIPDNRH YVILSKNVLA ASVVINSTVS SSEDTENVVF 360 HVLTDAQNFY AMKHWFARNS YRESAVNVIN YEQIIFENFP EFGTQQLYLP EEFRVFISSL 420 ERPTEKSRME YLSVFSHSHF FLAEIFKDLK KVIVLDDDVV VQRDISFLWN LDMGDKVNGA 480 VRFCGLKLGQ LKNLLGRTMY DQQSCAWMSG VNVIDLDKWR DHNVTENYLQ LLRKFGNNDD 540 EASLRASALP ISLLSFQHLL YPLDERLTLS GLGYDYGIKE EVAQSSASLH YNGNMKPWLE 600 LGIPDYRKYW KRFLTRDERF MDECNVSP* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02910 | PLN02910 | 2.0e-81 | 163 | 627 | 482 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| cd06429 | GT8_like_1 | 6.0e-82 | 330 | 615 | 286 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. | ||
| PLN02718 | PLN02718 | 5.0e-82 | 178 | 626 | 464 | + Probable galacturonosyltransferase | ||
| PLN02829 | PLN02829 | 5.0e-95 | 175 | 628 | 468 | + Probable galacturonosyltransferase | ||
| PLN02769 | PLN02769 | 0 | 1 | 627 | 628 | + Probable galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY89863.1 | 0 | 1 | 626 | 1 | 629 | hypothetical protein OsI_11412 [Oryza sativa Indica Group] |
| GenBank | EAZ26795.1 | 0 | 1 | 626 | 1 | 629 | hypothetical protein OsJ_10706 [Oryza sativa Japonica Group] |
| RefSeq | NP_001050007.1 | 0 | 1 | 628 | 1 | 631 | Os03g0330000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151802.1 | 0 | 1 | 628 | 1 | 629 | transferase, transferring glycosyl groups [Zea mays] |
| RefSeq | XP_002465323.1 | 0 | 1 | 628 | 1 | 628 | hypothetical protein SORBIDRAFT_01g036430 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ss9_A | 0.0002 | 429 | 524 | 76 | 169 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1ga8_A | 0.0004 | 429 | 524 | 76 | 169 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1g9r_A | 0.0004 | 429 | 524 | 76 | 169 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
