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Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb01g038130.1 |
Family | AA1 |
Protein Properties | Length: 601 Molecular Weight: 64954.6 Isoelectric Point: 7.4377 |
Chromosome | Chromosome/Scaffold: 1 Start: 61700988 End: 61703546 |
Description | laccase 5 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 35 | 580 | 0 |
RFYEFVVKETLVKRLCKSQKIVTVNGQFPGPTIEVYSGDTLAIKAVNLAPYNVTLHWHGLRQLRNGWADGPEFVTQCPIRPGGSYTYRFTTQGQEGTLWW HAHSSWLRATVHGALIIHPRRGLPYPFPKPQMEAPVILAEWWMRNPIAVLRQSMITGAPPNVSDALLINGQPGDLLPCSSQETSIIPVVAGETSLLRIIN AAMNTELFVSLAGHRMTVVAADAMYTKPFETDVVLLGPGQTTDVLVTAHAAPGRYYLAARAYASAQGVPFDNTTATAIFQYKNAPGCPTASAGAGAFSGP VGRSTRSSGHLGRAGPQPMLPFLPAFNDTNTATAFSNSLRSPAPVKVPGPVTQEVFTTVGFGLFNCRPGPFCQGPNNTRFGASMNNVSFQLPNTVSLLQA HYHHIPGVFTEDFPAFPPVFFDFTSQNVPRALWQPVKGTKLYRVEYGAVVQMVFQDTGIFAAEEHPMHIHGYHFFVLATGFGNYDPRRDEAKFNLVDPPS RNTIGVPVGGWAVVRFVADNPGVWLVHCHIDAHLTGGLAMALLVED |
Full Sequence |
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Protein Sequence Length: 601 Download |
MAATMARSGL VKLCCASALL LLGCFLLPGA LAEERFYEFV VKETLVKRLC KSQKIVTVNG 60 QFPGPTIEVY SGDTLAIKAV NLAPYNVTLH WHGLRQLRNG WADGPEFVTQ CPIRPGGSYT 120 YRFTTQGQEG TLWWHAHSSW LRATVHGALI IHPRRGLPYP FPKPQMEAPV ILAEWWMRNP 180 IAVLRQSMIT GAPPNVSDAL LINGQPGDLL PCSSQETSII PVVAGETSLL RIINAAMNTE 240 LFVSLAGHRM TVVAADAMYT KPFETDVVLL GPGQTTDVLV TAHAAPGRYY LAARAYASAQ 300 GVPFDNTTAT AIFQYKNAPG CPTASAGAGA FSGPVGRSTR SSGHLGRAGP QPMLPFLPAF 360 NDTNTATAFS NSLRSPAPVK VPGPVTQEVF TTVGFGLFNC RPGPFCQGPN NTRFGASMNN 420 VSFQLPNTVS LLQAHYHHIP GVFTEDFPAF PPVFFDFTSQ NVPRALWQPV KGTKLYRVEY 480 GAVVQMVFQD TGIFAAEEHP MHIHGYHFFV LATGFGNYDP RRDEAKFNLV DPPSRNTIGV 540 PVGGWAVVRF VADNPGVWLV HCHIDAHLTG GLAMALLVED GEAELEATIA PPLDLPICVL 600 * 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 1.0e-50 | 40 | 156 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 3.0e-60 | 50 | 574 | 556 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 2.0e-65 | 35 | 581 | 571 | + oxidoreductase | ||
TIGR03388 | ascorbase | 9.0e-75 | 35 | 581 | 573 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 35 | 598 | 568 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF11755.2 | 0 | 1 | 600 | 1 | 630 | Os03g0297900 [Oryza sativa Japonica Group] |
GenBank | EEE58886.1 | 0 | 41 | 600 | 91 | 679 | hypothetical protein OsJ_10502 [Oryza sativa Japonica Group] |
RefSeq | NP_001049841.1 | 0 | 11 | 600 | 1 | 681 | Os03g0297900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001145891.1 | 0 | 3 | 600 | 2 | 607 | hypothetical protein LOC100279407 [Zea mays] |
RefSeq | XP_002468016.1 | 0 | 1 | 600 | 1 | 600 | hypothetical protein SORBIDRAFT_01g038130 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 32 | 576 | 1 | 521 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1asq_A | 0 | 32 | 576 | 1 | 521 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1asp_B | 0 | 32 | 576 | 1 | 521 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1asp_A | 0 | 32 | 576 | 1 | 521 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1aso_B | 0 | 32 | 576 | 1 | 521 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |