| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g038640.1 |
| Family | GT43 |
| Protein Properties | Length: 368 Molecular Weight: 38676.7 Isoelectric Point: 9.5601 |
| Chromosome | Chromosome/Scaffold: 1 Start: 62153178 End: 62157304 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT43 | 131 | 349 | 0 |
| MAHTLRLVGPPLLWVVVEAAPEVPATARLLRATGLMYRHLTYKDNFTAADAAAGKERHHQRNVALGHIEHHRLAGVVLFAGLGDVFDLGFFDQLREISAF GAWPVATMWRDERKVVVRGPACSASAVTGWFSQDFSSNVNGTAPASASTARPSEVDVHGFAFNSSVLWDPERWGRYPTSEPDKSQDSMKFVQQVVLEDLS KVKGIPSDCSEVMVWHVDT | |||
| Full Sequence |
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| Protein Sequence Length: 368 Download |
| MGSSTDHGGA GGRGKKQAGG SQLWKKALLH SSLCFVMGFF TGFAPSSVSD WTSAAVAAGR 60 VGSSHVVRAL PTAAAAGGSG AVNRSLLAHG AAGGLLGLGD PASPRPLLVV VTTTESTPAA 120 SGERAAALTR MAHTLRLVGP PLLWVVVEAA PEVPATARLL RATGLMYRHL TYKDNFTAAD 180 AAAGKERHHQ RNVALGHIEH HRLAGVVLFA GLGDVFDLGF FDQLREISAF GAWPVATMWR 240 DERKVVVRGP ACSASAVTGW FSQDFSSNVN GTAPASASTA RPSEVDVHGF AFNSSVLWDP 300 ERWGRYPTSE PDKSQDSMKF VQQVVLEDLS KVKGIPSDCS EVMVWHVDTT APSSSSSSQP 360 SMHNKRR* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03360 | Glyco_transf_43 | 2.0e-34 | 131 | 349 | 234 | + Glycosyltransferase family 43. | ||
| cd00218 | GlcAT-I | 6.0e-55 | 106 | 349 | 249 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| PLN02458 | PLN02458 | 2.0e-94 | 22 | 345 | 341 | + transferase, transferring glycosyl groups | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF95369.1 | 0 | 1 | 343 | 1 | 337 | Glycosyltransferase family 43 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| DDBJ | BAF11694.2 | 0 | 1 | 343 | 1 | 337 | Os03g0287800 [Oryza sativa Japonica Group] |
| RefSeq | NP_001049780.1 | 0 | 1 | 366 | 1 | 357 | Os03g0287800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001147664.1 | 0 | 1 | 367 | 1 | 350 | beta3-glucuronyltransferase [Zea mays] |
| RefSeq | XP_002468048.1 | 0 | 1 | 367 | 1 | 367 | hypothetical protein SORBIDRAFT_01g038640 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v84_B | 2e-16 | 106 | 352 | 3 | 236 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 1v84_A | 2e-16 | 106 | 352 | 3 | 236 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 1v83_B | 2e-16 | 106 | 352 | 3 | 236 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 1v83_A | 2e-16 | 106 | 352 | 3 | 236 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 1v82_B | 2e-16 | 106 | 352 | 3 | 236 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CA210459 | 172 | 197 | 368 | 0 |
| EG377730 | 185 | 161 | 345 | 0 |
| FL187588 | 165 | 102 | 266 | 0 |
| EE157383 | 238 | 1 | 237 | 0 |
| EG377374 | 236 | 1 | 235 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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