| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g039410.1 |
| Family | GT14 |
| Protein Properties | Length: 415 Molecular Weight: 46551.4 Isoelectric Point: 9.7955 |
| Chromosome | Chromosome/Scaffold: 1 Start: 62834372 End: 62837928 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 68 | 322 | 0 |
| LAYLITGAGPGDGPRIRRLLRALYHPWNYYLVGVAGEDERADLEAFVRGQEAPRRYGNVRVAAAGEWGAVSRRGPTELAATLHAAAVLLREFDGWSWFIN LSASDYPLMPQDDILHIFSYMPRDLNFIEHTSNIGWKEHQRARPIIVDPALQVPNKTEVVTTKEKRSMPSAFKIFVGSSWVMLSRSFLEFCLLGWDNLPR TLLMYFTNFLSSSEGYFHTVICNSEYYQNTTVNSDLRFMAWDNPPRMHPVNLTAE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 415 Download |
| MRKLTPAHRL RWMRALLLAL PLLSLPILYA ALGAARSSSS TASASAPRLP QQQQQQEQRR 60 PPAPPPRLAY LITGAGPGDG PRIRRLLRAL YHPWNYYLVG VAGEDERADL EAFVRGQEAP 120 RRYGNVRVAA AGEWGAVSRR GPTELAATLH AAAVLLREFD GWSWFINLSA SDYPLMPQDD 180 ILHIFSYMPR DLNFIEHTSN IGWKEHQRAR PIIVDPALQV PNKTEVVTTK EKRSMPSAFK 240 IFVGSSWVML SRSFLEFCLL GWDNLPRTLL MYFTNFLSSS EGYFHTVICN SEYYQNTTVN 300 SDLRFMAWDN PPRMHPVNLT AEHFDAMANS GAPFAHSFAN DNSVLDMIDT KLLGRAHDRF 360 TPGGWCLGSS VGGKDPCTFL GRSFVLRPTK ASAKLEKLLL KLLEPDNFRP KQCK* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 7.0e-53 | 70 | 328 | 263 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 1.0e-115 | 70 | 414 | 348 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF95263.1 | 0 | 65 | 413 | 54 | 401 | glycosyltransferase family 14 protein, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEE58795.1 | 0 | 155 | 413 | 1 | 259 | hypothetical protein OsJ_10333 [Oryza sativa Japonica Group] |
| RefSeq | NP_001049716.1 | 0 | 65 | 371 | 54 | 359 | Os03g0276900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001152358.1 | 0 | 1 | 414 | 1 | 406 | BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Zea mays] |
| RefSeq | XP_002465469.1 | 0 | 1 | 414 | 1 | 414 | hypothetical protein SORBIDRAFT_01g039410 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.0000002 | 83 | 334 | 99 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.0000002 | 83 | 334 | 99 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.0000002 | 83 | 334 | 99 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.0000002 | 83 | 334 | 99 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.0000005 | 83 | 334 | 99 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
