| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g039690.1 |
| Family | AA1 |
| Protein Properties | Length: 577 Molecular Weight: 62694.7 Isoelectric Point: 8.3746 |
| Chromosome | Chromosome/Scaffold: 1 Start: 63184945 End: 63187783 |
| Description | laccase 17 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 27 | 563 | 0 |
| TRYYTFNVTMQKVTRLCTTRAIPTVNGKFPGPKIVTREGDRVVVKVVNNVKDNVTIHWHGVRQLRTGWSDGPAYVTQCPIQTGQSFVYNFTITGQRGTLF WHAHVSWLRATLYGPIVILPKRGVPYPFLPVKPYKEVPIIFGEWFNADPEAIIAQALQTGAGPNVSDAFTINGLPGPLYNCSSKDTFKLKVLPGKWYLLR LINAALNDELFFSIANHTLTVVDVDASYVKPFHTDIVLITPGQTTNVLLRAEPDAGCAAATHLMLARPYGTGQPGTFDNTTVAAVLEYAPAAAAGHIKSL PLFRPSLPALNDTAFAANYSARLRSLATPEFPATVPRAVDRSFFFAVGLGTNPCPANQTCQGPTNRTKFTASMNNVSFTMPTTALLQAHYDNIAGVYTAD FPVAPLEPFNYTGTTPNNTNVSSGTKVVVLEYNTSVEVVLQGTSVLGAESHPLHLHGFDFFVVGQGFGNYDSSKDPAKFNLDDPVQRNTVGVPSGGWVAI RFFADNPGVWFMHCHLEVHTSWGLKMAWVVNDGPLPE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 577 Download |
| MAAPSSLAFL LFFGTLLALP QSSHGATRYY TFNVTMQKVT RLCTTRAIPT VNGKFPGPKI 60 VTREGDRVVV KVVNNVKDNV TIHWHGVRQL RTGWSDGPAY VTQCPIQTGQ SFVYNFTITG 120 QRGTLFWHAH VSWLRATLYG PIVILPKRGV PYPFLPVKPY KEVPIIFGEW FNADPEAIIA 180 QALQTGAGPN VSDAFTINGL PGPLYNCSSK DTFKLKVLPG KWYLLRLINA ALNDELFFSI 240 ANHTLTVVDV DASYVKPFHT DIVLITPGQT TNVLLRAEPD AGCAAATHLM LARPYGTGQP 300 GTFDNTTVAA VLEYAPAAAA GHIKSLPLFR PSLPALNDTA FAANYSARLR SLATPEFPAT 360 VPRAVDRSFF FAVGLGTNPC PANQTCQGPT NRTKFTASMN NVSFTMPTTA LLQAHYDNIA 420 GVYTADFPVA PLEPFNYTGT TPNNTNVSSG TKVVVLEYNT SVEVVLQGTS VLGAESHPLH 480 LHGFDFFVVG QGFGNYDSSK DPAKFNLDDP VQRNTVGVPS GGWVAIRFFA DNPGVWFMHC 540 HLEVHTSWGL KMAWVVNDGP LPEQKLMPPP PDLPKC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 6.0e-44 | 33 | 149 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 3.0e-57 | 21 | 555 | 566 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 1.0e-71 | 21 | 550 | 557 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 9.0e-75 | 27 | 550 | 558 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 25 | 559 | 536 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI31651.1 | 0 | 10 | 576 | 526 | 1094 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001049699.1 | 0 | 26 | 576 | 30 | 578 | Os03g0273200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001131665.1 | 0 | 2 | 576 | 4 | 576 | hypothetical protein LOC100193025 [Zea mays] |
| RefSeq | XP_002465485.1 | 0 | 1 | 576 | 1 | 576 | hypothetical protein SORBIDRAFT_01g039690 [Sorghum bicolor] |
| RefSeq | XP_002531824.1 | 0 | 1 | 576 | 7 | 576 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 28 | 550 | 4 | 517 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 1asq_A | 0 | 28 | 550 | 4 | 517 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 1asp_B | 0 | 28 | 550 | 4 | 517 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 1asp_A | 0 | 28 | 550 | 4 | 517 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 1aso_B | 0 | 28 | 550 | 4 | 517 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
