| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g040750.1 |
| Family | GH35 |
| Protein Properties | Length: 861 Molecular Weight: 92952.7 Isoelectric Point: 5.4014 |
| Chromosome | Chromosome/Scaffold: 1 Start: 64050076 End: 64055753 |
| Description | beta-galactosidase 8 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 44 | 347 | 0 |
| LVIDGVRRVLVSGSIHYPRSTPDMWPGIIQKAKDGGLDVIETYVFWDIHEPVRGQYDFEGRKDLAAFVKTVADAGLYVHLRIGPYVCAEWNYGGFPLWLH FIPGIKFRTDNEPFKTEMQRFTAKVVDTMKGAGLYASQGGPIILSQIENEYGNIDSAYGAAGKAYMRWAAGMAISLDTGVPWVMCQQTDAPDPLINTCNG FYCDQFTPNSAAKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFYQRGGTFQNYYMYHGGTNLDRSSGGPFIATSYDYDAPIDEYGLVREPKWGHLR DVHK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 861 Download |
| MAATARLLPA FADAAAAAAA LLVVVLCLAG GARATNVTYD HRALVIDGVR RVLVSGSIHY 60 PRSTPDMWPG IIQKAKDGGL DVIETYVFWD IHEPVRGQYD FEGRKDLAAF VKTVADAGLY 120 VHLRIGPYVC AEWNYGGFPL WLHFIPGIKF RTDNEPFKTE MQRFTAKVVD TMKGAGLYAS 180 QGGPIILSQI ENEYGNIDSA YGAAGKAYMR WAAGMAISLD TGVPWVMCQQ TDAPDPLINT 240 CNGFYCDQFT PNSAAKPKMW TENWSGWFLS FGGAVPYRPV EDLAFAVARF YQRGGTFQNY 300 YMYHGGTNLD RSSGGPFIAT SYDYDAPIDE YGLVREPKWG HLRDVHKAIK LCEPALIATD 360 PSYTSLGQNA EAAVYKTGSV CAAFLANIDG QSDKTVTFNG RMYRLPAWSV SILPDCKNVV 420 LNTAQINSQV TSSEMRYLES SNMASDGSFI TPELAVSGWS YAIEPVGITK DNALTKAGLM 480 EQINTTADAS DFLWYSTSIT VKGDEPYLNG SQSNLVVNSL GHVLQVYING KIAGSAQGSA 540 SSSLISWQKP IELVPGKNKI DLLSATVGLS NYGAFFDLVG AGITGPVKLS GTNGALDLSS 600 AEWTYQIGLR GEDLHLYDPS EASPEWVSAN AYPINQPLIW YKTKFTPPAG DDPVAIDFTG 660 MGKGEAWVNG QSIGRYWPTN LAPQSGCVNS CNYRGSYNSN KCLKKCGQPS QTLYHVPRSF 720 LQPGSNDIVL FEQFGGDPSK ISFVIRQTGS VCAQVSEEHP AQIDSWNSSQ QTMQRYGPEL 780 RLECPKDGQV ISSIKFASFG TPSGTCGSYS HGECSSTQAL SVVQEACIGV SSCSVPVSSN 840 YFGNPCTGVT KSLAVEAACS * 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 5.0e-5 | 59 | 213 | 172 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 7.0e-21 | 37 | 339 | 368 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02140 | Gal_Lectin | 7.0e-23 | 782 | 859 | 82 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 5.0e-161 | 43 | 349 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 36 | 860 | 830 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY89299.1 | 0 | 32 | 860 | 28 | 861 | hypothetical protein OsI_10800 [Oryza sativa Indica Group] |
| RefSeq | NP_001049591.1 | 0 | 32 | 860 | 126 | 956 | Os03g0255100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001146370.1 | 0 | 27 | 860 | 20 | 852 | hypothetical protein LOC100279948 [Zea mays] |
| Swiss-Prot | Q10NX8 | 0 | 32 | 860 | 28 | 858 | BGAL6_ORYSJ RecName: Full=Beta-galactosidase 6; Short=Lactase 6; Flags: Precursor |
| RefSeq | XP_002465536.1 | 0 | 1 | 860 | 1 | 860 | hypothetical protein SORBIDRAFT_01g040750 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0 | 43 | 345 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.000006 | 436 | 740 | 318 | 578 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 3e-35 | 44 | 332 | 10 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 0.0008 | 525 | 748 | 411 | 586 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 3e-35 | 44 | 332 | 10 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
