y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb01g041160.1 |
Family | GH17 |
Protein Properties | Length: 379 Molecular Weight: 39717.4 Isoelectric Point: 8.6542 |
Chromosome | Chromosome/Scaffold: 1 Start: 64488348 End: 64490842 |
Description | beta-1,3-glucanase_putative |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 46 | 363 | 0 |
LGINYGRVGNNLPPPQSVVPLLAGLGIGRVRMYDADPTVLRAFAKTGVELIVGVPDECLAAVADPGGAAQWLKENVVPFLQDTKIAVLAVGNEVLTGSNS STLSRTLLPAMQSLHGAVAALGLDKQITVTTAHNLGVLGTSYPPSAGAFRKDLLPYLCPILDYHARTGSPFLVNAYPYFAYSSDPRGVQLEYALLDPGFA GVQDPNSRLHYPNLLVAQVDAVYHAIAAANAAASRVVEVRISETGWPSAGAANETAATPQNAARYNSNAMRLVADGKGTPLRPGAPLRAYVFALFNENLK PGLASERYYGLFNPDGTP |
Full Sequence |
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Protein Sequence Length: 379 Download |
MAPCCLLQIG RGLERARALR LAAALCAAVV ALALAPASDA TSASLLGINY GRVGNNLPPP 60 QSVVPLLAGL GIGRVRMYDA DPTVLRAFAK TGVELIVGVP DECLAAVADP GGAAQWLKEN 120 VVPFLQDTKI AVLAVGNEVL TGSNSSTLSR TLLPAMQSLH GAVAALGLDK QITVTTAHNL 180 GVLGTSYPPS AGAFRKDLLP YLCPILDYHA RTGSPFLVNA YPYFAYSSDP RGVQLEYALL 240 DPGFAGVQDP NSRLHYPNLL VAQVDAVYHA IAAANAAASR VVEVRISETG WPSAGAANET 300 AATPQNAARY NSNAMRLVAD GKGTPLRPGA PLRAYVFALF NENLKPGLAS ERYYGLFNPD 360 GTPAVTGGRG RRRQWQEH* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.002 | 286 | 360 | 78 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-90 | 47 | 364 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF85320.1 | 0 | 1 | 364 | 1 | 364 | unknown [Zea mays] |
GenBank | ACF88366.1 | 0 | 1 | 364 | 1 | 364 | unknown [Zea mays] |
GenBank | EEC83592.1 | 0 | 38 | 363 | 28 | 352 | hypothetical protein OsI_29271 [Oryza sativa Indica Group] |
RefSeq | NP_001150602.1 | 0 | 1 | 364 | 1 | 364 | LOC100284235 [Zea mays] |
RefSeq | XP_002465561.1 | 0 | 1 | 378 | 1 | 378 | hypothetical protein SORBIDRAFT_01g041160 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 46 | 363 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 46 | 360 | 2 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 46 | 360 | 2 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 46 | 360 | 2 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 46 | 360 | 2 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |