y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb01g041880.1 |
Family | GH17 |
Protein Properties | Length: 433 Molecular Weight: 44724.7 Isoelectric Point: 4.6281 |
Chromosome | Chromosome/Scaffold: 1 Start: 65107139 End: 65110870 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 32 | 343 | 0 |
IGVNYGTIADNLPPPASTASLLMSTSIGKLRLYEPQPDLVAALAGSNISILLGIPNGAVPNLASSPAAAASWAAANIPTTVPVSAISVGNELLNSGDPTL APQLLPAMQNLLAALPAGSTTKISTVHSMAVLSASDPPSSGAFHPDLAGSLDPVLDFLHQNGAPFMINPYPYFAYASDTRPETLAFCLFQPNAGRVDAVS GLTYTNMFDAQLDAIRAALDAKGYSDVEIVIAETGWPYKGDADEAGATVDNAKAYNTNLVAHLKSQVGTPRTPGKSVDTYIFALYDEDLKGGPESERSFG LYKTDLTANYDV |
Full Sequence |
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Protein Sequence Length: 433 Download |
MGIRRQHGAA TIVLGIILEL VLFRLATSQS FIGVNYGTIA DNLPPPASTA SLLMSTSIGK 60 LRLYEPQPDL VAALAGSNIS ILLGIPNGAV PNLASSPAAA ASWAAANIPT TVPVSAISVG 120 NELLNSGDPT LAPQLLPAMQ NLLAALPAGS TTKISTVHSM AVLSASDPPS SGAFHPDLAG 180 SLDPVLDFLH QNGAPFMINP YPYFAYASDT RPETLAFCLF QPNAGRVDAV SGLTYTNMFD 240 AQLDAIRAAL DAKGYSDVEI VIAETGWPYK GDADEAGATV DNAKAYNTNL VAHLKSQVGT 300 PRTPGKSVDT YIFALYDEDL KGGPESERSF GLYKTDLTAN YDVGLAKSSS TAAPTSLTPV 360 PAQGTPQPSK GTMPTGFCET TAAVPGSKQG QQLPQSSSCY IPGGAVSQRA DAGTWQLVLF 420 GVLLCLVTVA VN* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 6.0e-12 | 114 | 336 | 227 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-83 | 32 | 343 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF94756.1 | 0 | 1 | 429 | 1 | 423 | Glucan endo-1,3-beta-glucosidase 7 precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] |
GenBank | EEC74801.1 | 0 | 1 | 429 | 1 | 436 | hypothetical protein OsI_10603 [Oryza sativa Indica Group] |
RefSeq | NP_001049445.1 | 0 | 1 | 429 | 1 | 452 | Os03g0227400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147326.1 | 0 | 1 | 430 | 1 | 425 | LOC100280934 [Zea mays] |
RefSeq | XP_002468213.1 | 0 | 1 | 432 | 1 | 432 | hypothetical protein SORBIDRAFT_01g041880 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 32 | 346 | 2 | 316 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 3f55_C | 0 | 32 | 346 | 2 | 316 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 3f55_B | 0 | 32 | 346 | 2 | 316 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 3f55_A | 0 | 32 | 346 | 2 | 316 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 3em5_D | 0 | 32 | 346 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |