CAZyme Information

Basic Information
SpeciesSorghum bicolor
Cazyme IDSb01g042640.1
FamilyGH20
Protein PropertiesLength: 574 Molecular Weight: 62954.6 Isoelectric Point: 7.6548
ChromosomeChromosome/Scaffold: 1 Start: 65892971 End: 65895359
Descriptionbeta-hexosaminidase 2
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH202305230
  DVRRIVRFAESFGIRVIPEIDMPGHTGSWAAAYPEIVTCANKFWAPKAKPALAAEPCTGQLNPLNPKTYRVAQDVLRDLAALFPDPYLHAGADEVNTACW
  EDDPVVRGFLADGGSHDRLLELFVNATRPFLVHELNRTSVYWEDVLLGPKVSVGQTVLPRDTTVLQTWNNGAANTKRVVSAGYRVIVSSSSYYYLDCGHG
  GWVGNDSRYDVQEKEHDGMPLFNDPGGTGGSWCAPFKTWQRIYDYDILHGLTEDEARRVLGGEVALWSEQSDAAVLDSRLWPRASAAAETLWSG
Full Sequence
Protein Sequence     Length: 574     Download
MAASPYFLLL LLFLFHPLAA LAPLAPSPSP SPSQPSPPRS QPPPPRVPQQ VQVWPKPVSI    60
SWPLPVYAPL SPSFSIRASP SHPSLRHAIA YYTRLIRTER HAPIMPPVNY TIAGVPIRLL    120
ALSVSDPDTK LGPGVDESYT LSVPPNSSSA DISAATPWGV IRGLETFSQL AWSSSAAAAG    180
GQPIVPSDLE ISDHPLFTHR GVLLDTARNY YPVGDILRTI RAMAANKLND VRRIVRFAES    240
FGIRVIPEID MPGHTGSWAA AYPEIVTCAN KFWAPKAKPA LAAEPCTGQL NPLNPKTYRV    300
AQDVLRDLAA LFPDPYLHAG ADEVNTACWE DDPVVRGFLA DGGSHDRLLE LFVNATRPFL    360
VHELNRTSVY WEDVLLGPKV SVGQTVLPRD TTVLQTWNNG AANTKRVVSA GYRVIVSSSS    420
YYYLDCGHGG WVGNDSRYDV QEKEHDGMPL FNDPGGTGGS WCAPFKTWQR IYDYDILHGL    480
TEDEARRVLG GEVALWSEQS DAAVLDSRLW PRASAAAETL WSGNKGSNGR KRYANATVRL    540
NEWRHRMVAR GIRAEPIQPL WCPMHPHMCN LSQ* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd06570GH20_chitobiase-like_12.0e-35197416261+
cd02742GH20_hexosaminidase9.0e-38199522367+
cd06563GH20_chitobiase-like9.0e-50197528389+
pfam00728Glyco_hydro_208.0e-86197524366+
cd06562GH20_HexA_HexB-like4.0e-118197551394+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004563beta-N-acetylhexosaminidase activity
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACF87335.1015733599unknown [Zea mays]
GenBankEAZ03246.1023257347400hypothetical protein OsI_25394 [Oryza sativa Indica Group]
RefSeqNP_001049401.103757330605Os03g0219400 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001146582.1015733599hypothetical protein LOC100280178 [Zea mays]
RefSeqXP_002465632.103957339573hypothetical protein SORBIDRAFT_01g042640 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3vtr_A0135569125570A Chain A, Crystal Structure Of Insect Beta-n-acetyl-d-hexosaminidase Ofhex1 E328a Complexed With Tmg-chitotriomycin
PDB3s6t_A0135569128573A Chain A, Crystal Structure Of Insect Beta-N-Acetyl-D-Hexosaminidase Ofhex1 V327g Complexed With Pugnac
PDB3ozp_A0135569125570A Chain A, Crystal Structure Of Insect Beta-N-Acetyl-D-Hexosaminidase Ofhex1 V327g Complexed With Pugnac
PDB3ozo_A0135569125570A Chain A, Crystal Structure Of Insect Beta-N-Acetyl-D-Hexosaminidase Ofhex1 V327g Complexed With Pugnac
PDB3nsn_A0135569125570A Chain A, Crystal Structure Of Insect Beta-N-Acetyl-D-Hexosaminidase Ofhex1 V327g Complexed With Pugnac
Metabolic Pathways
Pathway NameReactionECProtein Name
chitin degradation IIRXN-12625EC-3.2.1.52β-L-N-acetylhexosaminidase
chitin degradation IIRXN-12626EC-3.2.1.52β-L-N-acetylhexosaminidase
Signal Peptide
Cleavage Site
20
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CD4460602622455060
FF3590582522294800
EC8861512831283730
EC8855082681283580
DR9715951983775740
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_022_00071.4Aquca_022_00071.3Aquca_022_00071.2Aquca_022_00071.1Aquca_010_00682.1
Aquca_004_00645.1
Arabidopsis lyrata475658485946470561
Arabidopsis thalianaAT1G65590.1AT3G55260.1AT1G05590.1
Brachypodium distachyonBradi2g57420.1Bradi2g25310.1Bradi2g37460.1Bradi3g44607.1Bradi1g69660.1
Bradi1g23740.1
Brassica rapaBra004121Bra014765Bra032460
Carica papayaevm.model.supercontig_197.26
Capsella rubellaCarubv10020116mCarubv10016974mCarubv10011603m
Chlamydomonas reinhardtiig11709.t1
Citrus clementinaCiclev10014808mCiclev10031174mCiclev10031139mCiclev10031669mCiclev10033772m
Ciclev10019509mCiclev10024601m
Citrus sinensisorange1.1g008945morange1.1g013337morange1.1g008821morange1.1g014971morange1.1g044344m
orange1.1g007722morange1.1g007610m
Cucumis sativusCucsa.165600.1Cucsa.178740.1Cucsa.165600.2.144.314Cucsa.165600.2.144.314Cucsa.177460.1
Cucsa.165600.2.312.421Cucsa.165600.2.312.421
Eucalyptus grandisEucgr.G02896.1Eucgr.L01476.1Eucgr.K02799.2Eucgr.K02799.1Eucgr.K02799.3
Eucgr.K02798.2Eucgr.K02798.1
Fragaria vescamrna26730.1-v1.0-hybridmrna02330.1-v1.0-hybrid
Glycine maxGlyma18g52290.1Glyma02g10570.1Glyma10g43710.1Glyma20g38400.1Glyma08g17200.1
Glyma08g16970.1Glyma15g41986.1
Gossypium raimondiiGorai.002G136400.2Gorai.002G136400.1Gorai.011G246500.1Gorai.012G068200.1Gorai.012G068200.2
Gorai.002G136400.3Gorai.012G068200.3Gorai.007G264000.1
Linum usitatissimumLus10003292Lus10030323Lus10022251Lus10030348Lus10007899
Malus domesticaMDP0000798095MDP0000262060.270.444MDP0000262060.270.444MDP0000564236MDP0000262060.174.257
MDP0000262060.174.257
Manihot esculentacassava4.1_033827mcassava4.1_033064mcassava4.1_004406mcassava4.1_007813mcassava4.1_023099m
cassava4.1_021615m
Medicago truncatulaMedtr2g062560.1
Mimulus guttatusmgv1a004365mmgv1a003720mmgv1a007861mmgv1a003512mmgv1a023788m
Oryza sativaLOC_Os01g66700.1LOC_Os05g34320.2LOC_Os05g34320.1LOC_Os05g02510.1LOC_Os05g34320.3
LOC_Os07g38790.1LOC_Os03g11980.1
Panicum virgatumPavirv00023753mPavirv00005093mPavirv00062644mPavirv00067910mPavirv00063863m
Pavirv00062646mPavirv00001875mPavirv00056279mPavirv00062645m.258.396Pavirv00062645m.258.396
Pavirv00060770mPavirv00016511mPavirv00054866mPavirv00049460mPavirv00062645m.174.254
Pavirv00062645m.174.254
Physcomitrella patensPp1s70_132V6.1Pp1s3_199V6.1
Phaseolus vulgarisPhvul.008G015400.1Phvul.007G010100.1Phvul.005G045300.1Phvul.005G043200.1
Picea abiesMA_177334g0010MA_271570g0010MA_92690g0010.179.289MA_92690g0010.179.289MA_92690g0010.297.429
MA_92690g0010.297.429
Populus trichocarpaPotri.008G079400.2Potri.008G079400.1Potri.010G211000.2Potri.010G211000.1Potri.010G211000.4
Potri.010G211000.3Potri.008G079400.5Potri.008G079400.3Potri.008G079400.4Potri.001G232800.1
Potri.001G232600.1
Prunus persicappa003880mppa002753m
Ricinus communis29929.m00450328180.m00037729616.m00021628180.m00037634575.m000024
47890.m000013
Setaria italicaSi001028mSi021738mSi024695mSi021693mSi029311m
Si034794m
Selaginella moellendorffii117332429308422139422155445016
422160429325441789422260
Sorghum bicolorSb09g020420.2Sb09g020420.1Sb09g001670.1Sb02g037280.1
Thellungiella halophilaThhalv10018379mThhalv10010264mThhalv10007181mThhalv10007179m
Vitis viniferaGSVIVT01016639001GSVIVT01006264001GSVIVT01004010001GSVIVT01006000001
Volvox carteriVocar20013124m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)