| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g045886.1 |
| Family | CE8 |
| Protein Properties | Length: 138 Molecular Weight: 14858.2 Isoelectric Point: 6.3354 |
| Chromosome | Chromosome/Scaffold: 1 Start: 68974199 End: 68975284 |
| Description | pectin methylesterase 31 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 18 | 136 | 2.1e-25 |
| DGVVSFASVQDAVDAVPLNNQVRTIIRIGPGVHRQPVHIPKTKKFITLCGSPIKDMVICWDNTTTHIKHTQSSQEEEIGIGTLNILTVIVEGGDFVAENV IFKNSASQVSGLAAAVHVM | |||
| Full Sequence |
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| Protein Sequence Length: 138 Download |
| GFYLLCLLTP EVAIFGYDGV VSFASVQDAV DAVPLNNQVR TIIRIGPGVH RQPVHIPKTK 60 KFITLCGSPI KDMVICWDNT TTHIKHTQSS QEEEIGIGTL NILTVIVEGG DFVAENVIFK 120 NSASQVSGLA AAVHVMAN 180 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02634 | PLN02634 | 3.0e-14 | 19 | 123 | 107 | + probable pectinesterase | ||
| PLN02480 | PLN02480 | 2.0e-14 | 7 | 133 | 139 | + Probable pectinesterase | ||
| PLN02665 | PLN02665 | 6.0e-18 | 18 | 123 | 107 | + pectinesterase family protein | ||
| PLN02682 | PLN02682 | 9.0e-20 | 23 | 124 | 102 | + pectinesterase family protein | ||
| PLN02773 | PLN02773 | 2.0e-44 | 18 | 138 | 121 | + pectinesterase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABG66073.1 | 9e-34 | 23 | 138 | 34 | 149 | Pectinesterase family protein, expressed [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151351.1 | 4e-34 | 22 | 138 | 23 | 137 | pectinesterase-1 [Zea mays] |
| RefSeq | XP_002305315.1 | 1e-33 | 18 | 138 | 11 | 129 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002464636.1 | 2e-33 | 23 | 138 | 81 | 194 | hypothetical protein SORBIDRAFT_01g022290 [Sorghum bicolor] |
| RefSeq | XP_002468434.1 | 0 | 1 | 138 | 1 | 138 | hypothetical protein SORBIDRAFT_01g045886 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0.00000000007 | 18 | 138 | 14 | 122 | A Chain A, Pectin Methylesterase From Carrot |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CA240648 | 135 | 4 | 138 | 0 |
| FD499886 | 121 | 18 | 138 | 8e-39 |
| CD888345 | 117 | 22 | 138 | 1e-38 |
| CD054162 | 117 | 22 | 138 | 2e-38 |
| AL821899 | 117 | 22 | 138 | 6e-38 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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