| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g047240.1 |
| Family | GT14 |
| Protein Properties | Length: 418 Molecular Weight: 46047.5 Isoelectric Point: 6.8305 |
| Chromosome | Chromosome/Scaffold: 1 Start: 70323346 End: 70331498 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 74 | 326 | 0 |
| LAFLLTGSAGDADRLQRLLLATYHPRNVYLLLLDRAASADDRARLARSARSAPGRDNVHVVGDPGFANPRGASALAATLHGAALLLRVDQGWDWFLHLDA DEYPLVTPDDLLHVFSYLPKDLNFIQHTSYIGWKEERQIRPIIVDPGLYLSSRNDIFYATQKRDLPNAYKLFTGSSSVILSRKFIEYCIVGMDNLPRTLL MYYTNMPLPHRKYFQTVLCNSPEFNETAVNHDLHYSTWDARSKNEPRLLTIDD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 418 Download |
| MQSAAAAAPS ALPHSVFPKD SRPLPCLLLT SLLLLLTLHL LSSSSPAPSP PPPQQPRLAP 60 LPSAASAGPA PPSLAFLLTG SAGDADRLQR LLLATYHPRN VYLLLLDRAA SADDRARLAR 120 SARSAPGRDN VHVVGDPGFA NPRGASALAA TLHGAALLLR VDQGWDWFLH LDADEYPLVT 180 PDDLLHVFSY LPKDLNFIQH TSYIGWKEER QIRPIIVDPG LYLSSRNDIF YATQKRDLPN 240 AYKLFTGSSS VILSRKFIEY CIVGMDNLPR TLLMYYTNMP LPHRKYFQTV LCNSPEFNET 300 AVNHDLHYST WDARSKNEPR LLTIDDLENM TDSGAAFGTR FPKDDHVLDH IDAEILHRLP 360 GDPVTGGWCI GVGHDSPCDI SGNPDVLRPG PKAVKLAKFL AERLSYQNFY GHQCIWD* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 1.0e-42 | 79 | 331 | 257 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 2.0e-109 | 79 | 414 | 340 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAO17353.1 | 0 | 16 | 417 | 19 | 417 | Hypothetical protein [Oryza sativa Japonica Group] |
| RefSeq | XP_002282998.1 | 0 | 43 | 415 | 46 | 430 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002299292.1 | 0 | 24 | 415 | 24 | 426 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002468516.1 | 0 | 1 | 417 | 1 | 417 | hypothetical protein SORBIDRAFT_01g047240 [Sorghum bicolor] |
| RefSeq | XP_002518166.1 | 0 | 46 | 417 | 66 | 438 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.0003 | 86 | 272 | 97 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.0003 | 86 | 272 | 97 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.0003 | 86 | 272 | 97 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.0003 | 86 | 272 | 97 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.0004 | 86 | 272 | 97 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
