| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g047270.1 |
| Family | GT47 |
| Protein Properties | Length: 600 Molecular Weight: 67948.8 Isoelectric Point: 5.5611 |
| Chromosome | Chromosome/Scaffold: 1 Start: 70358016 End: 70359866 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 140 | 480 | 0 |
| GGRYIYVHDLPPRFNEDMLRDCEKLSVWTNMCRFMSNDGLGPPLGNEEGVFSNTGWYGTNQFSVDVIFGNRMKQYECLTKDSSIAAAVFVPFYAGFDVAR YLWGYNTTTRDAASLDLVEWLMKKPEWSVMGGRDHFLVAGRITWDFRRLTDEESDWGSKLLFLPAAKNMSMLVVESSPWNSNDFGIPYPTYFHPAKDADV FLWQDRMRSLERPWLFSFAGAPRPGDPMSIRGQLIDQCRSSSVCKLLECDLGESKCHSPSTIMKMFQSSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHP GSAYVQYTWHLPKNYTRYSVFIPEDDVRSRNASIEERLKSI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 600 Download |
| MRRRSVLPSH HDDMEKGGGK PASSRLCFLA TLCAMFWVLI FYFHFAVVSN EPAVSAAQAT 60 GVRIDRSRIH IPELDGASRV DVPLAPPARA SEPPPPPPVA RPKETETETE TETETEAEAE 120 EEYPFERALK TAENKSDPCG GRYIYVHDLP PRFNEDMLRD CEKLSVWTNM CRFMSNDGLG 180 PPLGNEEGVF SNTGWYGTNQ FSVDVIFGNR MKQYECLTKD SSIAAAVFVP FYAGFDVARY 240 LWGYNTTTRD AASLDLVEWL MKKPEWSVMG GRDHFLVAGR ITWDFRRLTD EESDWGSKLL 300 FLPAAKNMSM LVVESSPWNS NDFGIPYPTY FHPAKDADVF LWQDRMRSLE RPWLFSFAGA 360 PRPGDPMSIR GQLIDQCRSS SVCKLLECDL GESKCHSPST IMKMFQSSLF CLQPQGDSYT 420 RRSAFDSMLA GCIPVFFHPG SAYVQYTWHL PKNYTRYSVF IPEDDVRSRN ASIEERLKSI 480 HPDVIKQMRE EVINLIPKVI YADPRSKLET LKDAFDVSVE AIINKVTKLR RDIIAGQEDK 540 DFIEENSWKY SLLEDGQRTI GPHEWDPFFS KPKDKGGDSS GSSAESAKNS WKSEQRGHS* 600 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 5.0e-71 | 138 | 480 | 359 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC74507.1 | 0 | 1 | 599 | 4 | 604 | hypothetical protein OsI_09988 [Oryza sativa Indica Group] |
| RefSeq | NP_001048945.1 | 0 | 1 | 599 | 4 | 604 | Os03g0144800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001147481.1 | 0 | 1 | 598 | 1 | 602 | xyloglucan galactosyltransferase KATAMARI 1 [Zea mays] |
| Swiss-Prot | Q8H038 | 0 | 14 | 599 | 1 | 588 | KATAM_ORYSJ RecName: Full=Xyloglucan galactosyltransferase KATAMARI1 homolog |
| RefSeq | XP_002468517.1 | 0 | 1 | 599 | 1 | 599 | hypothetical protein SORBIDRAFT_01g047270 [Sorghum bicolor] |
