| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb02g000630.1 |
| Family | AA6 |
| Protein Properties | Length: 217 Molecular Weight: 22226.3 Isoelectric Point: 5.5502 |
| Chromosome | Chromosome/Scaffold: 2 Start: 511365 End: 512254 |
| Description | Quinone reductase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA6 | 4 | 200 | 0 |
| KIYIVYYSTWGHVATLAEEIKKGADAVPGVEATVWRVVETLPEDVLGKMGAAPAHEDHPVISPRDLADADGVLLGFPTRFGMMAAQMKAFIDATGGLWQS QALAGKPAGVFLSTGTQGGGQETTALTAVTQLVHHGMLFVPLGYTFGAGMFGVDEVRGGSPYGAGTFAGADGSRTPSEVELAVARHQGTYFAGIAKK | |||
| Full Sequence |
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| Protein Sequence Length: 217 Download |
| MATKIYIVYY STWGHVATLA EEIKKGADAV PGVEATVWRV VETLPEDVLG KMGAAPAHED 60 HPVISPRDLA DADGVLLGFP TRFGMMAAQM KAFIDATGGL WQSQALAGKP AGVFLSTGTQ 120 GGGQETTALT AVTQLVHHGM LFVPLGYTFG AGMFGVDEVR GGSPYGAGTF AGADGSRTPS 180 EVELAVARHQ GTYFAGIAKK LKVGAAALDA EASASA* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00258 | Flavodoxin_1 | 4.0e-7 | 7 | 114 | 117 | + Flavodoxin. | ||
| pfam03358 | FMN_red | 6.0e-11 | 17 | 147 | 131 | + NADPH-dependent FMN reductase. | ||
| COG0655 | WrbA | 4.0e-38 | 1 | 202 | 208 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
| TIGR01755 | flav_wrbA | 1.0e-61 | 3 | 201 | 199 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
| PRK03767 | PRK03767 | 9.0e-77 | 3 | 202 | 200 | + NAD(P)H:quinone oxidoreductase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0010181 | FMN binding |
| GO:0016491 | oxidoreductase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF86423.1 | 0 | 1 | 202 | 1 | 200 | unknown [Zea mays] |
| RefSeq | NP_001146036.1 | 0 | 3 | 208 | 5 | 211 | hypothetical protein LOC100279567 [Zea mays] |
| RefSeq | XP_002461308.1 | 0 | 1 | 216 | 1 | 216 | hypothetical protein SORBIDRAFT_02g000630 [Sorghum bicolor] |
| RefSeq | XP_002518592.1 | 0 | 1 | 202 | 1 | 200 | Flavoprotein wrbA, putative [Ricinus communis] |
| RefSeq | XP_002534445.1 | 0 | 1 | 202 | 1 | 200 | Minor allergen Alt a, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3b6m_B | 0 | 4 | 202 | 3 | 197 | A Chain A, Peanut Peroxidase |
| PDB | 3b6m_A | 0 | 4 | 202 | 3 | 197 | A Chain A, Peanut Peroxidase |
| PDB | 3b6k_B | 0 | 4 | 202 | 3 | 197 | A Chain A, Peanut Peroxidase |
| PDB | 3b6k_A | 0 | 4 | 202 | 3 | 197 | A Chain A, Peanut Peroxidase |
| PDB | 3b6j_B | 0 | 4 | 202 | 3 | 197 | A Chain A, Peanut Peroxidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CA264869 | 196 | 1 | 196 | 0 |
| CA282464 | 194 | 1 | 194 | 0 |
| CJ777616 | 202 | 1 | 202 | 0 |
| HX153385 | 202 | 1 | 202 | 0 |
| HX167661 | 202 | 1 | 202 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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