| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb02g005780.1 |
| Family | GT31 |
| Protein Properties | Length: 666 Molecular Weight: 74161.8 Isoelectric Point: 8.8239 |
| Chromosome | Chromosome/Scaffold: 2 Start: 6829270 End: 6833709 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 433 | 615 | 0 |
| ERMAVRKSWMMYTRKSSNIVARFFVALNGKKEVNAELKKEAEFFQDIVIVPFIDSYDLVVLKTVAIAEYGVRVVPAKYVMKCDDDTFVRIDSVLDQVKKG RNDKSVYVGSINYFHRPLRSGKWAVTYEEWPEEVYPNYANGPGYVISSDIAHYIVSEFDNQTLRLFKMEDVSMGMWVEKFNKT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 666 Download |
| MPPAPAARKK RLVRAGLLTA AVGYFAFVLL FELPLLPFLA SSSSPAATSS SSSLPFQHPR 60 RRELEAAAAA FTSPYSPARP SKPAFPAAAP GPSSTPRLPI FSSLLLLPRP NATATPFDTT 120 AADAFAAAKP HLAHLQSIPN PASASTSASA PASSPPPPTC PASISVHREQ LPYDGVRVVE 180 LPCGLAVGSH VTVVARPRPA RPEYDPKIAE RKDGEAAVMV SQFMVELVGT KAVDGEAPPR 240 ILHFNPRIRG DYSRKPVIEM NSCYRMQWGQ SQRCEGFASR PAEDTVDGQL KCEKWIHDDD 300 NKSEESKMKW WVKRLIGRPK DVHISWPYPF TEGKLFVMTL TAGLEGYHVN VDGRHVASFP 360 YRTGYSLEDA TALSLNGDID IESIFASSLP NSHPSFAPER YLEMSEQWKA PPLPTEPVEL 420 FIGILSAASH FAERMAVRKS WMMYTRKSSN IVARFFVALN GKKEVNAELK KEAEFFQDIV 480 IVPFIDSYDL VVLKTVAIAE YGVRVVPAKY VMKCDDDTFV RIDSVLDQVK KGRNDKSVYV 540 GSINYFHRPL RSGKWAVTYE EWPEEVYPNY ANGPGYVISS DIAHYIVSEF DNQTLRLFKM 600 EDVSMGMWVE KFNKTRRPVE IRHDVRFYQS GCYNGYFTAH YQSPQHMICL WRKLQSGSAR 660 CCNVR* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00908 | Gal-bind_lectin | 2.0e-17 | 182 | 384 | 203 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| cd00070 | GLECT | 6.0e-22 | 178 | 385 | 208 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam01762 | Galactosyl_T | 9.0e-25 | 432 | 611 | 193 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| pfam00337 | Gal-bind_lectin | 6.0e-25 | 177 | 384 | 208 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| PLN03133 | PLN03133 | 1.0e-121 | 181 | 665 | 496 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN34354.1 | 0 | 3 | 665 | 2 | 661 | unknown [Zea mays] |
| DDBJ | BAC83183.1 | 0 | 1 | 665 | 1 | 655 | galactosyltransferase family-like protein [Oryza sativa Japonica Group] |
| GenBank | EEE66738.1 | 0 | 54 | 665 | 1 | 579 | hypothetical protein OsJ_23430 [Oryza sativa Japonica Group] |
| RefSeq | NP_001146977.1 | 0 | 3 | 665 | 2 | 663 | LOC100280586 [Zea mays] |
| RefSeq | XP_002461635.1 | 0 | 1 | 665 | 1 | 665 | hypothetical protein SORBIDRAFT_02g005780 [Sorghum bicolor] |
