| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb02g005800.2 |
| Family | GT31 |
| Protein Properties | Length: 509 Molecular Weight: 54601.9 Isoelectric Point: 5.6213 |
| Chromosome | Chromosome/Scaffold: 2 Start: 6846851 End: 6850910 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 433 | 502 | 9.6e-21 |
| ERMGVRTTWMSAVHKSPNRVARFFVALHGRNEVNVVLKKEAEFFGDIVFVPYLDNYDLVVMKTLAICEFM | |||
| Full Sequence |
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| Protein Sequence Length: 509 Download |
| MEGLAAVLLL YALLVFALES PFVSTSLSGG GAGAGAGTAR KLHLSFGGAG AGEHGAPARP 60 AKEPRPAAGG ASVSVSVSAP GADGQDRRLS RFATGLDVRL LDTPRSGVLR RSVADAVAAG 120 ARAFADLEGL DPNAVAAPSS GELEGGGAAA TARCPHSIAL TAEELGAQGG RGVVELPCGL 180 ALGSHVTVAA TPRGPHEERN PAIVVLRDGE RPAMVSQFMV ELQGLRAVEG EDPPRVLHFN 240 PRLRGDWSGR PVIEQNTCYR MNWGAAQRCD GWRSRPDEET VDGLVKCEKW IRDDDDRLEE 300 WKTSSKTAAW LLNRLIGQKE EVNFGWPFPF VEGRLFVLTL SAGLEGYHVS VDGRHVTSFP 360 YRTGFVLEDA TGLSLYGDLD VHSVIAGSLP TTHPSFEPQN YLEFSTVWQA PPLPDEPVEI 420 FIGILSSANH FAERMGVRTT WMSAVHKSPN RVARFFVALH GRNEVNVVLK KEAEFFGDIV 480 FVPYLDNYDL VVMKTLAICE FMLSLLNM* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00276 | GLECT | 8.0e-7 | 328 | 384 | 57 | + Galectin. Galectin - galactose-binding lectin | ||
| smart00908 | Gal-bind_lectin | 9.0e-14 | 177 | 384 | 208 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| cd00070 | GLECT | 6.0e-18 | 173 | 384 | 212 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam00337 | Gal-bind_lectin | 5.0e-21 | 173 | 384 | 212 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| PLN03133 | PLN03133 | 3.0e-64 | 153 | 501 | 359 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAS07235.1 | 0 | 19 | 507 | 34 | 498 | putative galactosyltransferase, 3'-partial [Oryza sativa Japonica Group] |
| GenBank | EAY92235.1 | 0 | 19 | 501 | 34 | 492 | hypothetical protein OsI_13955 [Oryza sativa Indica Group] |
| GenBank | EAZ03101.1 | 0 | 49 | 507 | 66 | 518 | hypothetical protein OsI_25245 [Oryza sativa Indica Group] |
| RefSeq | NP_001059116.1 | 0 | 49 | 501 | 68 | 500 | Os07g0195200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002463707.1 | 0 | 1 | 501 | 16 | 493 | hypothetical protein SORBIDRAFT_01g004630 [Sorghum bicolor] |
