| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb02g006210.1 |
| Family | AA6 |
| Protein Properties | Length: 217 Molecular Weight: 22812.1 Isoelectric Point: 6.2377 |
| Chromosome | Chromosome/Scaffold: 2 Start: 7739045 End: 7739837 |
| Description | flavodoxin-like quinone reductase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA6 | 9 | 207 | 0 |
| KIYVVYYSTYGHVARLAEEIKKGADSVAGVEATIWQVAETLPEEALAKMHAPAKREEHPVMVSGRQLADADGVLFGFPARFGMMAAQMKALFDSTGGLWQ AQALAGKPAGFFFALGTQGGGQEETALTAVSQLAHHGMVFVPVGYTFGEGMFDMDEVRCCSPYGSGTFAGKDGKSRLPSDAELQMAAHQGSYFAAFAKK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 217 Download |
| MDPSMAVTKI YVVYYSTYGH VARLAEEIKK GADSVAGVEA TIWQVAETLP EEALAKMHAP 60 AKREEHPVMV SGRQLADADG VLFGFPARFG MMAAQMKALF DSTGGLWQAQ ALAGKPAGFF 120 FALGTQGGGQ EETALTAVSQ LAHHGMVFVP VGYTFGEGMF DMDEVRCCSP YGSGTFAGKD 180 GKSRLPSDAE LQMAAHQGSY FAAFAKKLKA GAGVVA* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00258 | Flavodoxin_1 | 3.0e-12 | 12 | 145 | 144 | + Flavodoxin. | ||
| pfam03358 | FMN_red | 2.0e-13 | 22 | 153 | 132 | + NADPH-dependent FMN reductase. | ||
| COG0655 | WrbA | 2.0e-37 | 5 | 199 | 201 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
| TIGR01755 | flav_wrbA | 5.0e-56 | 8 | 200 | 193 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
| PRK03767 | PRK03767 | 1.0e-67 | 8 | 198 | 191 | + NAD(P)H:quinone oxidoreductase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0010181 | FMN binding |
| GO:0016491 | oxidoreductase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAW78582.1 | 0 | 5 | 212 | 1 | 203 | quinone reductase 2 [Triticum monococcum] |
| RefSeq | NP_001146036.1 | 0 | 6 | 216 | 3 | 212 | hypothetical protein LOC100279567 [Zea mays] |
| RefSeq | XP_002452306.1 | 0 | 5 | 216 | 1 | 218 | hypothetical protein SORBIDRAFT_04g023400 [Sorghum bicolor] |
| RefSeq | XP_002461308.1 | 0 | 8 | 211 | 3 | 204 | hypothetical protein SORBIDRAFT_02g000630 [Sorghum bicolor] |
| RefSeq | XP_002461673.1 | 0 | 1 | 216 | 1 | 216 | hypothetical protein SORBIDRAFT_02g006210 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4dy4_C | 0 | 9 | 209 | 2 | 196 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 4dy4_A | 0 | 9 | 209 | 2 | 196 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6m_B | 0 | 9 | 209 | 3 | 197 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6m_A | 0 | 9 | 209 | 3 | 197 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6k_B | 0 | 9 | 209 | 3 | 197 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EE163971 | 195 | 6 | 200 | 0 |
| EE164116 | 195 | 6 | 200 | 0 |
| EE021789 | 195 | 6 | 200 | 0 |
| BM348554 | 195 | 6 | 200 | 0 |
| BM340759 | 185 | 16 | 200 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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