| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb02g009870.1 |
| Family | GT5 |
| Protein Properties | Length: 608 Molecular Weight: 66506.5 Isoelectric Point: 6.6687 |
| Chromosome | Chromosome/Scaffold: 2 Start: 14392501 End: 14399244 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 83 | 579 | 0 |
| IIFVATEVHPWCKTGGLGDVVGGLPPALAAMGHRVMTIAPRYDQYKDAWDTSVLVEVNIGDTVETVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGAKLYG PTTGTDYRDNQLRFCLLCLAALEAPRVLNLNSEHFSGPYGEDVVFVANDWHTAVLPCYLKSMYKPNGIYANAKVAFCIHNIAYQGRFARADFELLNLPDS FLPSFDFIDGYVKPVVGRKINWMKAGIIESDLVLTVSPHYVKELTSGPEKGVELDGVLRTKPLETGIVNGMDVYEWDPATDKHISVKYDATTAPEARPLN KERLQAEVGLPVDSSIPVIIFVGRLEEQKGSDILIAAIPEFVGENVQIIVLGTGKKKMEEELTQLEVKYPNNARGIAKFNVPLAHMMFAGADFIIVPSRF EPCGLIQLQGMRYGVIPICSSTGGLVDTVKEGVTGFHMGSFSVECETVDPADVTAVASTVTRALKQYDTSAFHEMVQNCMAQDLSWKGPAKKWEEVL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 608 Download |
| MAAMMGSISA YGSYQTNRPS ALKQAPHMQF QQCCSSGVGF LSKHSQSMRS KTQLAKRRAT 60 NNGIHPKTTR PRAPIVCSTG MAIIFVATEV HPWCKTGGLG DVVGGLPPAL AAMGHRVMTI 120 APRYDQYKDA WDTSVLVEVN IGDTVETVRF FHCYKRGVDR VFVDHPMFLE KVWGKTGAKL 180 YGPTTGTDYR DNQLRFCLLC LAALEAPRVL NLNSEHFSGP YGEDVVFVAN DWHTAVLPCY 240 LKSMYKPNGI YANAKVAFCI HNIAYQGRFA RADFELLNLP DSFLPSFDFI DGYVKPVVGR 300 KINWMKAGII ESDLVLTVSP HYVKELTSGP EKGVELDGVL RTKPLETGIV NGMDVYEWDP 360 ATDKHISVKY DATTAPEARP LNKERLQAEV GLPVDSSIPV IIFVGRLEEQ KGSDILIAAI 420 PEFVGENVQI IVLGTGKKKM EEELTQLEVK YPNNARGIAK FNVPLAHMMF AGADFIIVPS 480 RFEPCGLIQL QGMRYGVIPI CSSTGGLVDT VKEGVTGFHM GSFSVECETV DPADVTAVAS 540 TVTRALKQYD TSAFHEMVQN CMAQDLSWKG PAKKWEEVLL GLGVEGSQAG IDGEEIAPLA 600 KENVATP* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 3.0e-83 | 79 | 577 | 517 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 3.0e-109 | 81 | 577 | 516 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 3.0e-135 | 81 | 578 | 509 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 6.0e-172 | 83 | 579 | 510 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 0 | 81 | 582 | 507 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG43100.1 | 0 | 1 | 607 | 1 | 609 | granule-bound starch synthase 1b [Zea mays] |
| GenBank | ACL54413.1 | 0 | 1 | 607 | 1 | 609 | unknown [Zea mays] |
| GenBank | ACY56072.1 | 0 | 1 | 607 | 1 | 608 | granule-bound starch synthase II [Oryza sativa Japonica Group] |
| RefSeq | NP_001106039.1 | 0 | 1 | 607 | 1 | 609 | granule bound starch synthase IIa precursor [Zea mays] |
| RefSeq | XP_002461889.1 | 0 | 1 | 607 | 1 | 607 | hypothetical protein SORBIDRAFT_02g009870 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 81 | 607 | 10 | 536 | A Chain A, Hevamine Mutant D125aE127A IN COMPLEX WITH TETRA-Nag |
| PDB | 3vue_A | 0 | 81 | 607 | 10 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 81 | 578 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 81 | 585 | 1 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 81 | 585 | 1 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| AJ568414 | 583 | 27 | 608 | 0 |
| HO825853 | 519 | 89 | 606 | 0 |
| HO629148 | 581 | 36 | 608 | 0 |
| CX101131 | 353 | 237 | 589 | 0 |
| CX101131 | 70 | 539 | 608 | 0.00001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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