| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb02g010030.1 |
| Family | GT1 |
| Protein Properties | Length: 558 Molecular Weight: 61414.8 Isoelectric Point: 6.957 |
| Chromosome | Chromosome/Scaffold: 2 Start: 14563011 End: 14570104 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT1 | 202 | 520 | 0 |
| FSADAIIANPAAYVQLLTEMSAYTGHVHVAEALNIPIHIIFTMPWTPTCEFPHPFSHVKQPAGYRLSYQIVDSFVWLGIRDMINDLRKRKLKLRPVTYLS GTHAYSNDIPHAYIWSPYLVPKPKDWGPKIDVVGFCFLDLASNYEPPEPLLRWLGSGESPIYIGFGSLPIPEPDKLTRIIVQALEITGQRGIINKGWGGL GNLEESKEFVYVLDNVPHDWLFLQCKAVVHHGGAGTTAAGLKAGCPTTIIPFFGDQFFWGSMVHARGLGAPPIPVEQLQLQSLIDAIKFMIDPKVKERAV QLAKAIESEDGVDGAVKSF | |||
| Full Sequence |
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| Protein Sequence Length: 558 Download |
| MDNTEFSETS SEVSGSERTR PVDSKNASSV LDTISIKKKL KLFSRMATLK DDGTVVVDIP 60 TNIEAASLDL PSEDHHNVAF GGGTLDSSDL QYRPPMQIAM LIVGTRGDVQ PFIAIGKRLQ 120 DYGHRVRLAT HANFKDFVMT TGLEFYPLGG DPKILAGYMV KNKGFLPATP SEIPIQRKQI 180 RDIIFSLLPA CKDPDIDTGV SFSADAIIAN PAAYVQLLTE MSAYTGHVHV AEALNIPIHI 240 IFTMPWTPTC EFPHPFSHVK QPAGYRLSYQ IVDSFVWLGI RDMINDLRKR KLKLRPVTYL 300 SGTHAYSNDI PHAYIWSPYL VPKPKDWGPK IDVVGFCFLD LASNYEPPEP LLRWLGSGES 360 PIYIGFGSLP IPEPDKLTRI IVQALEITGQ RGIINKGWGG LGNLEESKEF VYVLDNVPHD 420 WLFLQCKAVV HHGGAGTTAA GLKAGCPTTI IPFFGDQFFW GSMVHARGLG APPIPVEQLQ 480 LQSLIDAIKF MIDPKVKERA VQLAKAIESE DGVDGAVKSF LKHLPQKRDS EATPTAPQST 540 FMQPLLLPVK RCFGMAS* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR01426 | MGT | 0.007 | 101 | 512 | 432 | + glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production [Cellular processes, Toxin production and resistance]. | ||
| COG1819 | COG1819 | 7.0e-31 | 95 | 532 | 448 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| pfam03033 | Glyco_transf_28 | 6.0e-34 | 98 | 253 | 156 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| cd03784 | GT1_Gtf_like | 1.0e-115 | 96 | 523 | 432 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC15827.1 | 0 | 2 | 557 | 67 | 617 | putative UDP-glucose:sterol glucosyltransferase [Oryza sativa Japonica Group] |
| DDBJ | BAH01184.1 | 0 | 2 | 557 | 34 | 580 | unnamed protein product [Oryza sativa Japonica Group] |
| RefSeq | NP_001052094.1 | 0 | 1 | 556 | 60 | 609 | Os04g0131900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001059477.1 | 0 | 2 | 549 | 34 | 586 | Os07g0419500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002461897.1 | 0 | 1 | 557 | 1 | 557 | hypothetical protein SORBIDRAFT_02g010030 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 4e-29 | 96 | 530 | 1 | 387 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3h4i_A | 4e-29 | 96 | 530 | 1 | 387 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1rrv_B | 1e-21 | 96 | 507 | 1 | 383 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 1e-21 | 96 | 507 | 1 | 383 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1iir_A | 8e-21 | 96 | 528 | 1 | 402 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GT046352 | 346 | 105 | 450 | 0 |
| GO883166 | 347 | 56 | 402 | 0 |
| FL915783 | 255 | 95 | 349 | 0 |
| FL785638 | 270 | 237 | 506 | 0 |
| GT046352 | 32 | 443 | 474 | 0.075 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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