CAZyme Information

Basic Information
SpeciesSorghum bicolor
Cazyme IDSb02g019400.1
FamilyGT4
Protein PropertiesLength: 501 Molecular Weight: 55208.1 Isoelectric Point: 6.0038
ChromosomeChromosome/Scaffold: 2 Start: 46938005 End: 46939863
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT42824627.8e-22
  KHKGFVFLSVFKWEQRKGWDVLLRGFLQEFSGADDVVLYLLINAYHSDTNFSEKIRRFVVESSIEEPMEGWAEIRVIDEHVPQSVLPSLYKGANAFVLPT
  RGEGWGRPVVEAMAMELPVIVTNWSGPTEYLTEENGYPLDVDRLTEVTEGPFKGHLCAEPSIDRLRDLMRHVVDDRDEARN
Full Sequence
Protein Sequence     Length: 501     Download
MPGPGSAPTQ TPPPEPKPKH KGRRLVLLLG PPLVAVAVAL LLGVSTNPLP RRFLRLLLGT    60
KPSILSSSSP PDAAYEADAA TGAVRAPCVL WMAPFASGGG YCSEAWSYVD ALDAHAAGKS    120
NFTLAIAHHG DLDSPEFWLG LPERSKHLAY RLASERCELA RAVVVCHSEP GAWYPPMYEA    180
LPCPPTGYDD PAFVIGRTMF ETDRVCPEHV RRCNQMDAVW VPTDFHVSTF VKSGVDPTKV    240
VKVVQAVDVN FFDPAKHVAL ALPIGVSVMV PDGSRFGNGD SKHKGFVFLS VFKWEQRKGW    300
DVLLRGFLQE FSGADDVVLY LLINAYHSDT NFSEKIRRFV VESSIEEPME GWAEIRVIDE    360
HVPQSVLPSL YKGANAFVLP TRGEGWGRPV VEAMAMELPV IVTNWSGPTE YLTEENGYPL    420
DVDRLTEVTE GPFKGHLCAE PSIDRLRDLM RHVVDDRDEA RNKGKKARED MIERFSPEVV    480
ARIVAEKIQQ VLTHTQLTND * 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd03808GT1_cap1E_like2.0e-14342486146+
pfam00534Glycos_transf_18.0e-16361470111+
cd03801GT1_YqgM_like2.0e-18282482210+
cd03798GT1_wlbH_like2.0e-18272491229+
COG0438RfaG2.0e-19251492242+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACG32958.1010050013417glycosyl transferase, group 1 [Zea mays]
GenBankEEC84295.105949553488hypothetical protein OsI_30774 [Oryza sativa Indica Group]
RefSeqNP_001062800.105949552487Os09g0296700 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001137122.1015001499hypothetical protein LOC100217302 [Zea mays]
RefSeqXP_002462114.1015001500hypothetical protein SORBIDRAFT_02g019400 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2bfw_A0.00428644839190A Chain A, Structure Of The C Domain Of Glycogen Synthase From Pyrococcus Abyssi
PDB3l01_B0.008239448213405A Chain A, Crystal Structure Of Monomeric Glycogen Synthase From Pyrococcus Abyssi
PDB3l01_A0.008239448213405A Chain A, Crystal Structure Of Monomeric Glycogen Synthase From Pyrococcus Abyssi
PDB2bis_C0.008239448214406A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi
PDB2bis_B0.008239448214406A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi
Transmembrane Domains
StartEnd
2547
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DR967694252593060
CJ6886312341754080
GT8088202142804930
HO456398381904640
EG3747442141163280
Orthologous Group
SpeciesID
Brachypodium distachyonBradi4g27470.1
Citrus clementinaCiclev10015484m
Eucalyptus grandisEucgr.G02680.1
Oryza sativaLOC_Os09g12530.1
Panicum virgatumPavirv00055508m
Populus trichocarpaPotri.008G018200.1
Setaria italicaSi029608m
Vitis viniferaGSVIVT01034635001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny