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Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb02g023140.1 |
Family | AA1 |
Protein Properties | Length: 571 Molecular Weight: 62655 Isoelectric Point: 7.5231 |
Chromosome | Chromosome/Scaffold: 2 Start: 56601683 End: 56603523 |
Description | Cupredoxin superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 313 | 549 | 9.30462e-43 |
TAILSYYSGRSSPRKPPPTTPPTGPAWNDTTYRFRQSVATVAHPAHVQPPPPRADRTILLLNTQNKIDGRIKWALNNVSFTLPHTPYLVAMKSGLLGAFD QRPPPETYAHQGYDVYAPPPNPAATVSDGLYRLQFGSVVDVVLQNANMLAANKSETHPWHLHGHDFWVLGYGIGRFDPAVHPASYNLKDPILKNTVAVHP YGWTALRFKADNPGVWAFHCHIESHFFMGMGIVFEEG | |||
AA1 | 79 | 351 | 0 |
NVAIHWHGIRQIGTPWADGTEGVTQCPILPGDTFNYTFVVDRPGTYMYHAHYGMQRSAGLNGMIVVNSARGGPDGEPFTYDGEHDVLLNDWWHKSTYEEA TGLASVPIIWVGEPQSLLINGRGRWFSCSRMAAGACNATLPECAAPVFAVVPGKTYRFRIASVTSLSALNFEIEGHNMTVVEADGHYVKPFVVKNLNIYS GETYSVTITADQDPNRNYWVASNVISREPGTPTGTAILSYYSGRSSPRKPPPTTPPTGPAWNDTTYRFRQSVA |
Full Sequence |
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Protein Sequence Length: 571 Download |
MGWQPRLLCC LFLSLSLAAA ARAAATVHQE WEISYQFKSP DCVRKLAVTI NGQTPGPTIR 60 ATQGDTVVVT VRNSLLTENV AIHWHGIRQI GTPWADGTEG VTQCPILPGD TFNYTFVVDR 120 PGTYMYHAHY GMQRSAGLNG MIVVNSARGG PDGEPFTYDG EHDVLLNDWW HKSTYEEATG 180 LASVPIIWVG EPQSLLINGR GRWFSCSRMA AGACNATLPE CAAPVFAVVP GKTYRFRIAS 240 VTSLSALNFE IEGHNMTVVE ADGHYVKPFV VKNLNIYSGE TYSVTITADQ DPNRNYWVAS 300 NVISREPGTP TGTAILSYYS GRSSPRKPPP TTPPTGPAWN DTTYRFRQSV ATVAHPAHVQ 360 PPPPRADRTI LLLNTQNKID GRIKWALNNV SFTLPHTPYL VAMKSGLLGA FDQRPPPETY 420 AHQGYDVYAP PPNPAATVSD GLYRLQFGSV VDVVLQNANM LAANKSETHP WHLHGHDFWV 480 LGYGIGRFDP AVHPASYNLK DPILKNTVAV HPYGWTALRF KADNPGVWAF HCHIESHFFM 540 GMGIVFEEGV ERVAQLPQEI MGCGKTKGGH * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR03390 | ascorbOXfungal | 2.0e-82 | 42 | 549 | 537 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. | ||
TIGR03389 | laccase | 2.0e-107 | 42 | 546 | 532 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
TIGR03388 | ascorbase | 0 | 26 | 566 | 548 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
PLN02604 | PLN02604 | 0 | 28 | 568 | 546 | + oxidoreductase | ||
PLN02191 | PLN02191 | 0 | 27 | 567 | 549 | + L-ascorbate oxidase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN27982.1 | 0 | 1 | 570 | 1 | 569 | unknown [Zea mays] |
RefSeq | NP_001063005.1 | 0 | 1 | 570 | 2 | 577 | Os09g0365900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002462284.1 | 0 | 1 | 570 | 1 | 570 | hypothetical protein SORBIDRAFT_02g023140 [Sorghum bicolor] |
RefSeq | XP_002462285.1 | 0 | 26 | 570 | 25 | 571 | hypothetical protein SORBIDRAFT_02g023150 [Sorghum bicolor] |
RefSeq | XP_002462286.1 | 0 | 24 | 570 | 33 | 579 | hypothetical protein SORBIDRAFT_02g023160 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 28 | 566 | 5 | 541 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 1asq_A | 0 | 28 | 566 | 5 | 541 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 1asp_B | 0 | 28 | 566 | 5 | 541 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 1asp_A | 0 | 28 | 566 | 5 | 541 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 1aso_B | 0 | 28 | 566 | 5 | 541 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |