| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb02g023150.1 |
| Family | AA1 |
| Protein Properties | Length: 572 Molecular Weight: 62665.2 Isoelectric Point: 8.0308 |
| Chromosome | Chromosome/Scaffold: 2 Start: 56649618 End: 56655081 |
| Description | Cupredoxin superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 315 | 550 | 4.79945e-42 |
| AVLSYYGGRSSPRKAPPTTPPTGPAWNDTTYRFRQSVATVAHPAHVQPPPPRADRTILLLNTQNKIDGHIKWALNNVSFTLPHTPYLVAMKNGLLGAFDQ RPPPETYAHQGYDIYAVQRNPNATVSDGLYRLQFGSVVDVVLQNANMLAANKSETHPWHLHGHDFWVLGYGIGRFDPAVHPAAYNLKDPILKNTVAVHPY GWTALRFKADNPGVWAFHCHIESHFFMGMGIVFEEG | |||
| AA1 | 78 | 337 | 0 |
| NVAIHWHGIRQIGTPWADGTEGVTQCPILPGDTFTYTFVVDRPGTYMYHAHYGMQRSAGLNGLIVVAAARGGPDAEPFRYDGEHHVLLNDWWHKSTYEQA TGLASVPLGWVGEPQSLLINGRGRFVNCSAAAAAGMTCNATLPECAAPVFAVVPGKTYRFRIASVTSLSALNFEIEGHEMTVVEADGHYVKPFVVKNLNI YSGETYSVLIKADQDPNRNYWLASNVVSREPGTPTGTAVLSYYGGRSSPRKAPPTTPPTG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 572 Download |
| MGRLPWLLCC LFLSLSLAAA ARAATVHQEW EISYQFKSPD CVRKLAVTIN GQTPGPTIRA 60 TQGDTVVVRV KNSLLTENVA IHWHGIRQIG TPWADGTEGV TQCPILPGDT FTYTFVVDRP 120 GTYMYHAHYG MQRSAGLNGL IVVAAARGGP DAEPFRYDGE HHVLLNDWWH KSTYEQATGL 180 ASVPLGWVGE PQSLLINGRG RFVNCSAAAA AGMTCNATLP ECAAPVFAVV PGKTYRFRIA 240 SVTSLSALNF EIEGHEMTVV EADGHYVKPF VVKNLNIYSG ETYSVLIKAD QDPNRNYWLA 300 SNVVSREPGT PTGTAVLSYY GGRSSPRKAP PTTPPTGPAW NDTTYRFRQS VATVAHPAHV 360 QPPPPRADRT ILLLNTQNKI DGHIKWALNN VSFTLPHTPY LVAMKNGLLG AFDQRPPPET 420 YAHQGYDIYA VQRNPNATVS DGLYRLQFGS VVDVVLQNAN MLAANKSETH PWHLHGHDFW 480 VLGYGIGRFD PAVHPAAYNL KDPILKNTVA VHPYGWTALR FKADNPGVWA FHCHIESHFF 540 MGMGIVFEEG VERVAQLPKE ITGCGMTKGG H* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03390 | ascorbOXfungal | 3.0e-86 | 41 | 550 | 536 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. | ||
| TIGR03389 | laccase | 2.0e-110 | 41 | 564 | 554 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| TIGR03388 | ascorbase | 0 | 25 | 567 | 548 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| PLN02604 | PLN02604 | 0 | 27 | 569 | 546 | + oxidoreductase | ||
| PLN02191 | PLN02191 | 0 | 26 | 568 | 551 | + L-ascorbate oxidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN27982.1 | 0 | 27 | 571 | 28 | 569 | unknown [Zea mays] |
| DDBJ | BAD33459.1 | 0 | 7 | 571 | 7 | 576 | putative syringolide-induced protein B13-1-1 [Oryza sativa Japonica Group] |
| RefSeq | XP_002462284.1 | 0 | 25 | 571 | 26 | 570 | hypothetical protein SORBIDRAFT_02g023140 [Sorghum bicolor] |
| RefSeq | XP_002462285.1 | 0 | 1 | 571 | 1 | 571 | hypothetical protein SORBIDRAFT_02g023150 [Sorghum bicolor] |
| RefSeq | XP_002462286.1 | 0 | 21 | 571 | 31 | 579 | hypothetical protein SORBIDRAFT_02g023160 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 27 | 567 | 5 | 541 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 1asq_A | 0 | 27 | 567 | 5 | 541 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 1asp_B | 0 | 27 | 567 | 5 | 541 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 1asp_A | 0 | 27 | 567 | 5 | 541 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 1aso_B | 0 | 27 | 567 | 5 | 541 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
