| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb02g023160.1 |
| Family | AA1 |
| Protein Properties | Length: 580 Molecular Weight: 63460.9 Isoelectric Point: 6.7243 |
| Chromosome | Chromosome/Scaffold: 2 Start: 56657530 End: 56661262 |
| Description | Cupredoxin superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 346 | 558 | 9.99967e-42 |
| PAWNDTMYRFQQSVATVAHPAHVEPPPPRADRTILLLNTQNKIDGHIKWALNGVSFRLPHTPYLVAMKNGLLGAFDQRPPPENYTHQGYDVYAPPPNPNA TISDGLYRLQFGSVVDVVLQNANMLAANKCETHPWHLHGHDFWVLGYGIGRFDPAVHPASYNLQDPILKNTVAVHPYGWTAVRFKADNPGVWAFHCHIEA HFFMGMGIVFEEG | |||
| AA1 | 88 | 358 | 0 |
| NLAIHWHGIRQIGTPWADGTEGVTQCPILPGDTFTYAFVVDRPGTYMYHAHYGMQRSAGLYGVIVVAVAEDPGGEVDGAEPFAYDDEHDVLLNDWWHSST HEQAVGLASVPMVWVGEPHSLLINGRGRFDCSAAAVPGTCNATSPECAAPVFAVVPGKTYRFRIASVTSLSALNFEIEGHEMTVVEADGHYVKPFVVKNL NIYSGETYSVLIKADQDPNRNYWLASNVVSREPATPTGTAILSYSGDRAPPSTTPPTGPAWNDTMYRFQQS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 580 Download |
| MALLPRAAPA RHAQRLLCSL FLCLSLSTLL ARAATRRHEW EVSYQFKSPD CVRKLSATIN 60 GQTPGPTIRA TQGDTVEVKV TNSLLTENLA IHWHGIRQIG TPWADGTEGV TQCPILPGDT 120 FTYAFVVDRP GTYMYHAHYG MQRSAGLYGV IVVAVAEDPG GEVDGAEPFA YDDEHDVLLN 180 DWWHSSTHEQ AVGLASVPMV WVGEPHSLLI NGRGRFDCSA AAVPGTCNAT SPECAAPVFA 240 VVPGKTYRFR IASVTSLSAL NFEIEGHEMT VVEADGHYVK PFVVKNLNIY SGETYSVLIK 300 ADQDPNRNYW LASNVVSREP ATPTGTAILS YSGDRAPPST TPPTGPAWND TMYRFQQSVA 360 TVAHPAHVEP PPPRADRTIL LLNTQNKIDG HIKWALNGVS FRLPHTPYLV AMKNGLLGAF 420 DQRPPPENYT HQGYDVYAPP PNPNATISDG LYRLQFGSVV DVVLQNANML AANKCETHPW 480 HLHGHDFWVL GYGIGRFDPA VHPASYNLQD PILKNTVAVH PYGWTAVRFK ADNPGVWAFH 540 CHIEAHFFMG MGIVFEEGIQ RVANLPPEIM GCGKTKGGH* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03390 | ascorbOXfungal | 1.0e-86 | 38 | 558 | 555 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. | ||
| TIGR03389 | laccase | 2.0e-106 | 51 | 555 | 531 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| TIGR03388 | ascorbase | 0 | 38 | 575 | 546 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| PLN02604 | PLN02604 | 0 | 38 | 577 | 546 | + oxidoreductase | ||
| PLN02191 | PLN02191 | 0 | 40 | 576 | 546 | + L-ascorbate oxidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN27982.1 | 0 | 38 | 579 | 29 | 569 | unknown [Zea mays] |
| RefSeq | NP_001063005.1 | 0 | 11 | 579 | 3 | 577 | Os09g0365900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002462284.1 | 0 | 35 | 579 | 26 | 570 | hypothetical protein SORBIDRAFT_02g023140 [Sorghum bicolor] |
| RefSeq | XP_002462285.1 | 0 | 35 | 579 | 25 | 571 | hypothetical protein SORBIDRAFT_02g023150 [Sorghum bicolor] |
| RefSeq | XP_002462286.1 | 0 | 1 | 579 | 1 | 579 | hypothetical protein SORBIDRAFT_02g023160 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 33 | 575 | 1 | 541 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 1asq_A | 0 | 33 | 575 | 1 | 541 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 1asp_B | 0 | 33 | 575 | 1 | 541 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 1asp_A | 0 | 33 | 575 | 1 | 541 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 1aso_B | 0 | 33 | 575 | 1 | 541 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
