| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb02g027840.1 |
| Family | GT8 |
| Protein Properties | Length: 706 Molecular Weight: 79411.2 Isoelectric Point: 9.8982 |
| Chromosome | Chromosome/Scaffold: 2 Start: 63109689 End: 63113065 |
| Description | galacturonosyltransferase 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT8 | 367 | 677 | 0 |
| CLTLRLTNEYYFTNSKNKDFPYVQKLEDPKLYHYALFSDNVLAAAVVVNSTLVHAKKPEKHVFHIVTDRLNYAAMKMWFLANPLGKAAIQVQNIEEFTWL NSSYSPVLKQLETQFMINYYFRTGHARHDENPKFRNPKYLSILNHLRFYLPEIFPKLNKVLFLDDDTVVQRDLSALWLVDLKGKVNGAVETCRQAFHRFD KYLNFSNPLIAKNFDPHACGWAYGMNMFDLSEWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDHSWHQLGLGYNPNVNEKDIRRAAVI HYNGNLKPWLE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 706 Download |
| MLLRRRRRCR GVVLLLLLAS VLAPLVLYGG SPVSVAPLPD STVASGAFDP EGASNLVWPH 60 MAASAVSLAK DLIIERLGEH KNRVLSATDR WQVVEAGSSK SRPSGKSDTA AVRERRAEEE 120 GDPVVVGNGS AGLGQDGIIK EVVGSQRRAD GSGETGDSRE VGEQNGKEVG MELPHATDVL 180 QKNGSDGLEM NDGSGLRTVR ILNSSSIKES GAHSSSNKTR EQQTSASNSN TAHHGTNSIA 240 GQTTTLSDAT IHIIKDQLTR AKMYLGLFAS RGNHGFVREL RARMRDIQRA LGDATSDRQL 300 PQNVHSKIRA MEQTLVKVRR IHDSCSSAVN RIKTVLHSTE QQLESNKRQA NYLAQVAAKS 360 LPKGLHCLTL RLTNEYYFTN SKNKDFPYVQ KLEDPKLYHY ALFSDNVLAA AVVVNSTLVH 420 AKKPEKHVFH IVTDRLNYAA MKMWFLANPL GKAAIQVQNI EEFTWLNSSY SPVLKQLETQ 480 FMINYYFRTG HARHDENPKF RNPKYLSILN HLRFYLPEIF PKLNKVLFLD DDTVVQRDLS 540 ALWLVDLKGK VNGAVETCRQ AFHRFDKYLN FSNPLIAKNF DPHACGWAYG MNMFDLSEWR 600 KQNITEVYHT WQKLNENRLL WKLGTLPAGL VTFWNRTFPL DHSWHQLGLG YNPNVNEKDI 660 RRAAVIHYNG NLKPWLEIGL PKYRKYWSAH VNYDQVFLRE CNINP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02829 | PLN02829 | 0 | 203 | 705 | 505 | + Probable galacturonosyltransferase | ||
| PLN02910 | PLN02910 | 0 | 247 | 704 | 462 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| PLN02742 | PLN02742 | 0 | 256 | 703 | 454 | + Probable galacturonosyltransferase | ||
| PLN02718 | PLN02718 | 0 | 216 | 703 | 491 | + Probable galacturonosyltransferase | ||
| PLN02523 | PLN02523 | 0 | 298 | 705 | 413 | + galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAJ19325.1 | 0 | 5 | 705 | 6 | 697 | glycosyl transferase-like protein [Triticum aestivum] |
| EMBL | CAJ26362.1 | 0 | 35 | 705 | 35 | 689 | glycosyl transferase-like protein [Brachypodium sylvaticum] |
| GenBank | EAZ09508.1 | 0 | 5 | 705 | 6 | 679 | hypothetical protein OsI_31783 [Oryza sativa Indica Group] |
| RefSeq | NP_001063487.1 | 0 | 5 | 705 | 6 | 707 | Os09g0480400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002460421.1 | 0 | 34 | 705 | 34 | 705 | hypothetical protein SORBIDRAFT_02g027840 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ss9_A | 0.003 | 502 | 675 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1ga8_A | 0.005 | 502 | 675 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1g9r_A | 0.005 | 502 | 675 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
