| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb02g031260.1 |
| Family | GH35 |
| Protein Properties | Length: 804 Molecular Weight: 90159.8 Isoelectric Point: 7.0124 |
| Chromosome | Chromosome/Scaffold: 2 Start: 66231991 End: 66237566 |
| Description | beta-galactosidase 11 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 43 | 346 | 0 |
| LLIDGKRDLFFSGAIHYPRSPPEVWPKLLDRAKEGGLNTIETYIFWNAHEPEPGKYNFEGRLDLVKFLKMIQEHGMYAIVRIGPFIQAEWNHGGLPYWLR EIDHIIFRANNDPYKKEMEKWTRFVVQKLKDAELFASQGGPVILTQIENEYGNIKKDHKIEGDKYLEWAAQMALSTQTGVPWIMCKQSSAPGEVIPTCNG RHCGDTWTLRDKNKPMLWTENWTQQFRAYGDQLAMRSAEDIAYAVLRFFAKGGSMVNYYMYHGGTNFGRTSASYVLTGYYDEAPLDEYGMYKEPKFGHLR DLHN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 804 Download |
| MTVRAAAVLV AAAALALLLP GWAAAEWTLT KKGSVVTYDA RSLLIDGKRD LFFSGAIHYP 60 RSPPEVWPKL LDRAKEGGLN TIETYIFWNA HEPEPGKYNF EGRLDLVKFL KMIQEHGMYA 120 IVRIGPFIQA EWNHGGLPYW LREIDHIIFR ANNDPYKKEM EKWTRFVVQK LKDAELFASQ 180 GGPVILTQIE NEYGNIKKDH KIEGDKYLEW AAQMALSTQT GVPWIMCKQS SAPGEVIPTC 240 NGRHCGDTWT LRDKNKPMLW TENWTQQFRA YGDQLAMRSA EDIAYAVLRF FAKGGSMVNY 300 YMYHGGTNFG RTSASYVLTG YYDEAPLDEY GMYKEPKFGH LRDLHNVIRS YQKAFLSGKH 360 SSEILGHGYE AQIFELPEEN LCLSFLSNNN TGEDGTVIFR GVKHYVPSRS VSILAGCKDV 420 VYNTKRVFVQ HSERSYHTSE VTSKNNQWEM YSEMVPKYKD TKIRTKEPLE QYNQTKDASD 480 YLWYTTSFRL ESDDLPFRGD IRPVLQVKSS AHSMIGFAND AFVGSARGNK QVKGFMFEKP 540 VDLKAGVNHV VLLSSTMGMK DSGGELAEVK GGIQECLIQG LNTGTLDLQV NGWGHKRYFD 600 EPDGDDPIVL DMSSMSKGMI FVNGEGIGRY WVSFRTLAGT PSQAVYHIPR PFLKPKDNLL 660 VVFEEEMGKP DGILVQTVTR DDICLLISEH NPGQIKTWDT DGVKIKLIAE DHSVRGTLMC 720 PPEKIIQEVV FASFGNPDGM CGNFTVGTCH TPNAKQIVEK ECLGKPSCML PVDHTVYGAD 780 INCQSTTGTL GVQVRCRGGK KGA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 3.0e-9 | 63 | 194 | 150 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 5.0e-18 | 720 | 796 | 80 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 9.0e-22 | 36 | 213 | 185 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 8.0e-141 | 42 | 348 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 36 | 796 | 823 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAG30724.1 | 0 | 25 | 796 | 24 | 825 | putative beta-galactosidase precursor [Hordeum vulgare] |
| EMBL | CAG30731.1 | 0 | 26 | 802 | 28 | 836 | beta-galactosidase precursor [Triticum monococcum] |
| GenBank | EEE70132.1 | 0 | 26 | 797 | 26 | 831 | hypothetical protein OsJ_30164 [Oryza sativa Japonica Group] |
| Swiss-Prot | Q0IZZ8 | 0 | 26 | 794 | 26 | 828 | BGL12_ORYSJ RecName: Full=Beta-galactosidase 12; Short=Lactase 12; Flags: Precursor |
| RefSeq | XP_002460584.1 | 0 | 28 | 803 | 28 | 803 | hypothetical protein SORBIDRAFT_02g031260 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 3.00004e-41 | 42 | 344 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 2e-40 | 30 | 354 | 5 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 2e-40 | 30 | 354 | 5 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 2e-40 | 30 | 354 | 5 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
