| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb02g034070.1 |
| Family | CBM57 |
| Protein Properties | Length: 640 Molecular Weight: 70144.9 Isoelectric Point: 7.314 |
| Chromosome | Chromosome/Scaffold: 2 Start: 68575352 End: 68580722 |
| Description | receptor like protein 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 216 | 372 | 9e-26 |
| KPAFDEDLNGIRWGGDRFWLGLQTLSSSSDDQSISTENVIAETLLAPNFYPQSIYQSAIVGTDRQPSLSFEMDVTPNKNYSVWLHFAEIDNGVTAEEQRV FDVLINGDTAFKDVDIIRMTGERFTALVLNKTVAVSGTTLKVILQPVKGTRAIINAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 640 Download |
| MRWRSPAVLH LLRLWLLAAS ASSAALGVLA SDLSKEPFTI RISCGSFDDI RTAPTNTLWY 60 RDFGYTGGRF ANATRPSFII PPLKTLRYFP LSDGPENCYN INNVPNGHYQ VRLFFALLDN 120 PNLDSEPIFD VSVEGTLFSS LLLGWSSDDE KTFAEALVFV QDSSLSVCFH STGHGDPSIL 180 SIEVLQIDDN AYNFGPPWGK GAVLRTAKRL KCGSGKPAFD EDLNGIRWGG DRFWLGLQTL 240 SSSSDDQSIS TENVIAETLL APNFYPQSIY QSAIVGTDRQ PSLSFEMDVT PNKNYSVWLH 300 FAEIDNGVTA EEQRVFDVLI NGDTAFKDVD IIRMTGERFT ALVLNKTVAV SGTTLKVILQ 360 PVKGTRAIIN AIEVFEIIPA EKKTLPQEVS ALRTLKGSLG LPLRLGWNGD PCVPQQHPWS 420 GVDCQFDNTK GNWIIDGLGL DNQGLKGVIP SDISKLQHLQ NINLSGNSIK GNIPISLGTI 480 SALQVLDLSY NELNGSIPES LGELALLQIL NLNGNRLSGR VPASLGGRPL HRARFNFTDN 540 AGLCGIPGLR ECGPHLSVAA KIGMAFGVLL AILFLVVFAA CWWKRRQNIL RAKRLAAARE 600 APYAKSRTQF TRDVQMTKHQ RTHESVRSSN NESSPHLLS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 1.0e-13 | 438 | 525 | 88 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 9.0e-14 | 438 | 527 | 90 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 6.0e-15 | 435 | 527 | 93 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam12819 | Malectin_like | 3.0e-68 | 42 | 377 | 354 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0 | 35 | 639 | 605 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI30598.1 | 0 | 37 | 639 | 24 | 624 | unnamed protein product [Vitis vinifera] |
| GenBank | EAZ39920.1 | 0 | 21 | 638 | 19 | 591 | hypothetical protein OsJ_24359 [Oryza sativa Japonica Group] |
| RefSeq | NP_001059721.1 | 0 | 21 | 638 | 19 | 636 | Os07g0501800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002462899.1 | 0 | 1 | 639 | 1 | 639 | hypothetical protein SORBIDRAFT_02g034070 [Sorghum bicolor] |
| RefSeq | XP_002509445.1 | 0 | 37 | 639 | 27 | 629 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rgz_A | 0.0000000000003 | 410 | 554 | 611 | 750 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 3rgz_A | 0.00000003 | 438 | 525 | 399 | 486 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 3rgz_A | 0.00000005 | 435 | 525 | 468 | 558 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 3rgz_A | 0.0000003 | 445 | 574 | 430 | 559 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 3rgz_A | 0.00002 | 459 | 552 | 396 | 489 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
