| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb02g035600.2 |
| Family | GH14 |
| Protein Properties | Length: 380 Molecular Weight: 42473.1 Isoelectric Point: 4.5993 |
| Chromosome | Chromosome/Scaffold: 2 Start: 69991535 End: 69994435 |
| Description | beta-amylase 5 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 224 | 323 | 5.6e-29 |
| HPASMNFTCAEMRDNEQSSEAKSAPEELVQQVLSAGWREGLNLACENALSRYDATAYNTILRNARPQGINKNGAPEHKLYGFTYLRVSDELFEGENYTTF | |||
| GH14 | 13 | 225 | 0 |
| YAMLPLDIITVDNTFEKEDETRAQLKKLTEAGVDGVMIDVWWGLVEGKEPGVYDWSAYKQVFKLVQEAGLKLQAIMSCHQCGGNVGDVVNIPIPQWVRDV GEDNPDIFYTNREGVRNIEYLTLGVDDQPLFHGRTAIQLYADYMKSFRENMADFLDAGVIVDIEVGLGPAGEMRYPSYPQSQGWVYPGIGEFICYDKYLK ADFKAAAAAAGHP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 380 Download |
| MAGNALANYV QVYAMLPLDI ITVDNTFEKE DETRAQLKKL TEAGVDGVMI DVWWGLVEGK 60 EPGVYDWSAY KQVFKLVQEA GLKLQAIMSC HQCGGNVGDV VNIPIPQWVR DVGEDNPDIF 120 YTNREGVRNI EYLTLGVDDQ PLFHGRTAIQ LYADYMKSFR ENMADFLDAG VIVDIEVGLG 180 PAGEMRYPSY PQSQGWVYPG IGEFICYDKY LKADFKAAAA AAGHPASMNF TCAEMRDNEQ 240 SSEAKSAPEE LVQQVLSAGW REGLNLACEN ALSRYDATAY NTILRNARPQ GINKNGAPEH 300 KLYGFTYLRV SDELFEGENY TTFKTFVRRM HANLDYNPKV DPVAPLKRSK PEIPIEEILA 360 VAQPRLKPFP FEKNTDLPV* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02803 | PLN02803 | 3.0e-24 | 224 | 330 | 107 | + beta-amylase | ||
| PLN02801 | PLN02801 | 2.0e-73 | 224 | 379 | 160 | + beta-amylase | ||
| PLN02905 | PLN02905 | 1.0e-83 | 9 | 225 | 217 | + beta-amylase | ||
| PLN02803 | PLN02803 | 6.0e-88 | 10 | 224 | 216 | + beta-amylase | ||
| PLN02801 | PLN02801 | 5.0e-146 | 4 | 225 | 222 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD15902.1 | 0 | 1 | 225 | 1 | 225 | beta-amylase [Zea mays] |
| GenBank | AAD15902.1 | 0 | 224 | 379 | 333 | 488 | beta-amylase [Zea mays] |
| GenBank | ADB81912.1 | 0 | 9 | 225 | 2 | 218 | beta-amylase [Sorghum bicolor] |
| RefSeq | NP_001105496.1 | 0 | 1 | 225 | 1 | 225 | beta amylase5 [Zea mays] |
| RefSeq | NP_001105496.1 | 0 | 224 | 379 | 333 | 488 | beta amylase5 [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2xgi_A | 0 | 1 | 225 | 1 | 225 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| PDB | 2xgi_A | 0 | 224 | 379 | 333 | 488 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| PDB | 2xgb_A | 0 | 1 | 225 | 1 | 225 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| PDB | 2xgb_A | 0 | 224 | 379 | 333 | 488 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| PDB | 2xg9_A | 0 | 1 | 225 | 1 | 225 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CN148207 | 247 | 134 | 380 | 0 |
| CX622550 | 225 | 1 | 225 | 0 |
| CX617425 | 225 | 1 | 225 | 0 |
| CX618121 | 225 | 1 | 225 | 0 |
| CN149100 | 225 | 1 | 225 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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