| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb02g038510.1 |
| Family | CBM43 |
| Protein Properties | Length: 195 Molecular Weight: 18897.1 Isoelectric Point: 5.5082 |
| Chromosome | Chromosome/Scaffold: 2 Start: 72737566 End: 72741374 |
| Description | plasmodesmata callose-binding protein 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 21 | 103 | 4.8e-33 |
| WCVCRQDATQAALQKTIDYACGSGADCNSIHENGACYNPNTVPAHCSWAANSYYQNNKAKGATCDFTGTATLTTSDPSSSGCS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 195 Download |
| MKALVVTVLL LLSSTLAVSQ WCVCRQDATQ AALQKTIDYA CGSGADCNSI HENGACYNPN 60 TVPAHCSWAA NSYYQNNKAK GATCDFTGTA TLTTSDPSSS GCSYPTSASA AGTMTPTTGG 120 TMGGTPGTFT PGTGTGTTGT GMGTGTATGT TGFGGLGPGT NAGMDTAAAA GLLLPTAGLA 180 TALAALLFSA IVLA* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 3.0e-18 | 20 | 91 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-33 | 20 | 104 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF83296.1 | 0 | 20 | 175 | 20 | 177 | unknown [Zea mays] |
| GenBank | ACG46419.1 | 0 | 20 | 175 | 20 | 179 | glucan endo-1,3-beta-glucosidase 3 precursor [Zea mays] |
| GenBank | EAZ04609.1 | 0 | 4 | 188 | 2 | 186 | hypothetical protein OsI_26758 [Oryza sativa Indica Group] |
| RefSeq | NP_001148400.1 | 0 | 20 | 175 | 20 | 179 | glucan endo-1,3-beta-glucosidase 3 [Zea mays] |
| RefSeq | XP_002460971.1 | 0 | 1 | 166 | 1 | 166 | hypothetical protein SORBIDRAFT_02g038510 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 3e-18 | 17 | 106 | 9 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
