| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb02g040340.1 |
| Family | CBM43 |
| Protein Properties | Length: 207 Molecular Weight: 21325.2 Isoelectric Point: 6.4705 |
| Chromosome | Chromosome/Scaffold: 2 Start: 74311257 End: 74314100 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 58 | 139 | 3.4e-30 |
| CVAKQGADPTALQMGLNWACGPGQANCAPIQPGGSCYKQDNLEALASYAYNDYYQKNFATGASCNFNGTAATTTSDPSSGQC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 207 Download |
| MLVVREWNSK MFGKRLHGFL LLLVFLLANV AGSHAETTVD PDSVDGSKRR SLATSLFCVA 60 KQGADPTALQ MGLNWACGPG QANCAPIQPG GSCYKQDNLE ALASYAYNDY YQKNFATGAS 120 CNFNGTAATT TSDPSSGQCV FTGSSMAGGS TPAASAPSGL SPPSTFTPGI GSPSNTLIPL 180 DGAESLVSSA RWAICALLLA LPLFFL* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 8.0e-17 | 56 | 127 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-33 | 56 | 141 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC82508.1 | 0 | 1 | 205 | 23 | 246 | hypothetical protein OsI_26988 [Oryza sativa Indica Group] |
| GenBank | EEE67655.1 | 0 | 1 | 205 | 38 | 261 | hypothetical protein OsJ_25253 [Oryza sativa Japonica Group] |
| RefSeq | NP_001060371.1 | 0 | 11 | 205 | 1 | 214 | Os07g0633100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001150091.1 | 0 | 1 | 195 | 3 | 199 | LOC100283720 [Zea mays] |
| RefSeq | XP_002463238.1 | 0 | 1 | 206 | 1 | 206 | hypothetical protein SORBIDRAFT_02g040340 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 0.0000000000004 | 57 | 141 | 13 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
