| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb02g040720.1 |
| Family | AA2 |
| Protein Properties | Length: 388 Molecular Weight: 41717.1 Isoelectric Point: 5.7364 |
| Chromosome | Chromosome/Scaffold: 2 Start: 74619285 End: 74620878 |
| Description | peroxidase 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 120 | 362 | 0 |
| IGAGLIRLHFHDCFVQGCDASVLLNTTASGNSDTEREGGANKNSLRGLDVIDKAKAALEKACPSTAVSCADILAFAARDAARNLSGGKIEYKTPAGRWDG RESSADETGTLPGPFSPLDTLVAKFADQGLNRTDLVLLSAAHSIGRARCIFRSSRPGMNQTLVDDLNGQCKSNTSSVNQDYKTPDVLDSQYYQNVFDNDA LFDSDAALTSSIYTKALVETYRTNLMNQFEKDFGEAMVKMGKI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 388 Download |
| MMAAAWKNKH AALIITVLAF LAPMACHGGG LINFTLLCSG GWVRPITVSL PPLVTITIGC 60 PNNGPSEDPY VPPSPNPNNE PAPPSGAGLY LDYYNYSCPN AETIVREVVE DEIAKQGRGI 120 GAGLIRLHFH DCFVQGCDAS VLLNTTASGN SDTEREGGAN KNSLRGLDVI DKAKAALEKA 180 CPSTAVSCAD ILAFAARDAA RNLSGGKIEY KTPAGRWDGR ESSADETGTL PGPFSPLDTL 240 VAKFADQGLN RTDLVLLSAA HSIGRARCIF RSSRPGMNQT LVDDLNGQCK SNTSSVNQDY 300 KTPDVLDSQY YQNVFDNDAL FDSDAALTSS IYTKALVETY RTNLMNQFEK DFGEAMVKMG 360 KIKTKTKGDK DVEIRKQCWT YNAPPNY* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00692 | ligninase | 5.0e-7 | 211 | 321 | 111 | + Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| cd00314 | plant_peroxidase_like | 2.0e-16 | 105 | 340 | 264 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
| pfam00141 | peroxidase | 2.0e-45 | 105 | 343 | 239 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 4.0e-47 | 86 | 382 | 315 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 4.0e-103 | 88 | 378 | 305 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ04858.1 | 0 | 72 | 382 | 76 | 384 | hypothetical protein OsI_27037 [Oryza sativa Indica Group] |
| RefSeq | NP_001060411.1 | 0 | 70 | 382 | 69 | 384 | Os07g0638800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001141847.1 | 0 | 73 | 382 | 55 | 360 | hypothetical protein LOC100273989 [Zea mays] |
| RefSeq | XP_002463259.1 | 0 | 23 | 382 | 17 | 368 | hypothetical protein SORBIDRAFT_02g040710 [Sorghum bicolor] |
| RefSeq | XP_002463260.1 | 0 | 1 | 387 | 1 | 387 | hypothetical protein SORBIDRAFT_02g040720 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1qo4_A | 0 | 93 | 382 | 7 | 304 | A Chain A, Peanut Peroxidase |
| PDB | 1pa2_A | 0 | 93 | 382 | 7 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 3hdl_A | 0 | 89 | 383 | 2 | 304 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 1qgj_B | 0 | 92 | 382 | 5 | 299 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1qgj_A | 0 | 92 | 382 | 5 | 299 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
