| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb02g040740.1 |
| Family | AA2 |
| Protein Properties | Length: 361 Molecular Weight: 38619.5 Isoelectric Point: 9.0487 |
| Chromosome | Chromosome/Scaffold: 2 Start: 74638262 End: 74639638 |
| Description | Peroxidase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 91 | 343 | 0 |
| PGLGAGLIRMAFHDCFVQGCDGSVLLDPTPANPRPEKLSPANFPSLRGFDVVDAAKAALEKACPGVVSCADVVQFAARDAAFFLSGSKVYYSLPGGRFDG RVSFENETFTFLPPPSFNLSELIQNFKVKGLNVDDLVVLSGAHTIGLSHCSSFLSISTPPSDMNPGLATVLKKQCPAKPNFTNDPTVVQDVVTPDKLDNQ YYRNVLHHKVLFKSDAALLNSTETAKKVAENALIRGRWERKFAKAMLKMSLLD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 361 Download |
| MARLGVIVLV ALLAAAAAQA QGSYGSGYAV PALSLESAPV PPPISSPPPA QTPPPPASAR 60 PKLRFDFYKR SCPYAEEIVR EAVRNATNVN PGLGAGLIRM AFHDCFVQGC DGSVLLDPTP 120 ANPRPEKLSP ANFPSLRGFD VVDAAKAALE KACPGVVSCA DVVQFAARDA AFFLSGSKVY 180 YSLPGGRFDG RVSFENETFT FLPPPSFNLS ELIQNFKVKG LNVDDLVVLS GAHTIGLSHC 240 SSFLSISTPP SDMNPGLATV LKKQCPAKPN FTNDPTVVQD VVTPDKLDNQ YYRNVLHHKV 300 LFKSDAALLN STETAKKVAE NALIRGRWER KFAKAMLKMS LLDIKTAANG EIRKKCHVVN 360 * 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00314 | plant_peroxidase_like | 8.0e-24 | 77 | 340 | 292 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
| pfam00141 | peroxidase | 2.0e-60 | 79 | 237 | 160 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 2.0e-63 | 64 | 360 | 311 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 2.0e-136 | 62 | 359 | 305 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY90172.1 | 0 | 1 | 360 | 1 | 339 | hypothetical protein OsI_11737 [Oryza sativa Indica Group] |
| RefSeq | NP_001050193.1 | 0 | 1 | 360 | 1 | 339 | Os03g0369400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001060413.1 | 0 | 57 | 360 | 18 | 321 | Os07g0639000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002461100.1 | 0 | 1 | 360 | 1 | 360 | hypothetical protein SORBIDRAFT_02g040740 [Sorghum bicolor] |
| RefSeq | XP_002463262.1 | 0 | 21 | 360 | 24 | 364 | hypothetical protein SORBIDRAFT_02g040750 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3hdl_A | 0 | 63 | 360 | 2 | 303 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 1sch_B | 0 | 62 | 360 | 1 | 294 | A Chain A, Peanut Peroxidase |
| PDB | 1sch_A | 0 | 62 | 360 | 1 | 294 | A Chain A, Peanut Peroxidase |
| PDB | 1bgp_A | 0 | 61 | 360 | 7 | 305 | A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 |
| PDB | 1qgj_B | 0 | 66 | 360 | 5 | 299 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
