| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb02g042960.1 |
| Family | GH27 |
| Protein Properties | Length: 432 Molecular Weight: 47146.5 Isoelectric Point: 5.7399 |
| Chromosome | Chromosome/Scaffold: 2 Start: 76702586 End: 76707503 |
| Description | Melibiase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH27 | 250 | 363 | 1.4e-27 |
| SMTDIADKNNKWASYAGPGGWNDPDMLEVGNGGMTSAEYRSHFSIWALMKAPLLIGCDVRNMTSETMEILSNKEVIQVNQDPLGVQGRKILGEGKYGCRE VWAGPLSGNRLVIA | |||
| GH27 | 48 | 162 | 9.1e-33 |
| RLYDTSNYGRLQLNNGLALTPQMGWNSWNFFACNINETVIRETADALVSTGLAALGYNFVNIDDCWSYVKRGKQDQLLPDPKTFPSGIKALADYVHGKGL KLGIYSDAGKFTCQV | |||
| GH27 | 152 | 259 | 2.1e-35 |
| YSDAGKFTCQVRPGSLDHESDDAAIFASWGVDYLKYDNCYNLGIKPQKRYPPMRDALNSTGRQIFYSLCEWGQDDPALWAGKVGNSWRTTDDITDTWQSM TDIADKNN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 432 Download |
| MEAPARLPIS LLVVSALLLL LSAQGPAGAA AAAVPPRIQP LATAALRRLY DTSNYGRLQL 60 NNGLALTPQM GWNSWNFFAC NINETVIRET ADALVSTGLA ALGYNFVNID DCWSYVKRGK 120 QDQLLPDPKT FPSGIKALAD YVHGKGLKLG IYSDAGKFTC QVRPGSLDHE SDDAAIFASW 180 GVDYLKYDNC YNLGIKPQKR YPPMRDALNS TGRQIFYSLC EWGQDDPALW AGKVGNSWRT 240 TDDITDTWQS MTDIADKNNK WASYAGPGGW NDPDMLEVGN GGMTSAEYRS HFSIWALMKA 300 PLLIGCDVRN MTSETMEILS NKEVIQVNQD PLGVQGRKIL GEGKYGCREV WAGPLSGNRL 360 VIALWNRCSE TANITMKLPA VGLDGSAAYS VRDLWKHETL SENVVGTFGA QVDVHDTKMY 420 IFSPATSVAS I* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02065 | Melibiase | 1.0e-25 | 66 | 223 | 204 | + Melibiase. | ||
| PLN03231 | PLN03231 | 2.0e-26 | 68 | 333 | 352 | + putative alpha-galactosidase; Provisional | ||
| PLN02692 | PLN02692 | 1.0e-175 | 57 | 426 | 371 | + alpha-galactosidase | ||
| PLN02229 | PLN02229 | 0 | 36 | 431 | 396 | + alpha-galactosidase | ||
| PLN02808 | PLN02808 | 0 | 57 | 424 | 369 | + alpha-galactosidase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC82687.1 | 0 | 37 | 430 | 33 | 426 | hypothetical protein OsI_27343 [Oryza sativa Indica Group] |
| RefSeq | NP_001060639.1 | 0 | 37 | 430 | 31 | 424 | Os07g0679300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001130661.1 | 0 | 31 | 431 | 25 | 425 | hypothetical protein LOC100191764 [Zea mays] |
| RefSeq | NP_191190.2 | 0 | 6 | 426 | 6 | 431 | alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, putative [Arabidopsis thaliana] |
| RefSeq | XP_002461216.1 | 0 | 1 | 431 | 1 | 431 | hypothetical protein SORBIDRAFT_02g042960 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1uas_A | 0 | 60 | 424 | 1 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
| PDB | 3a5v_A | 0 | 61 | 422 | 2 | 390 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| PDB | 1ktc_A | 0 | 60 | 424 | 1 | 386 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| PDB | 1ktb_A | 0 | 60 | 424 | 1 | 386 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
| PDB | 3lrl_A | 0 | 62 | 399 | 24 | 401 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| melibiose degradation | ALPHAGALACTOSID-RXN | EC-3.2.1.22 | α-galactosidase |
| stachyose degradation | RXN-11501 | EC-3.2.1.22 | α-galactosidase |
