| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb02g043170.1 |
| Family | GT8 |
| Protein Properties | Length: 628 Molecular Weight: 71908.9 Isoelectric Point: 9.4029 |
| Chromosome | Chromosome/Scaffold: 2 Start: 76920456 End: 76925290 |
| Description | galacturonosyltransferase 7 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT8 | 299 | 599 | 0 |
| CLSMRLTLEYFKSSSLDSDDSPGKFSSPEYRHYVILSRNVLAASVVINSTVSSSKEPGHLAFHILTDAQNYYAMKHWFARNSYKNAATQVINYEAIILEK LPKYTIRQLYLPEEFRVLIRSIKQPTENTRMKYLSLFSHSHFVIPEIFKYLNKVVVLDDDVVVQRDLSFLWNIDMGDKVNGAVELCGLKLGEMKNVLGKT AYDPNLCAWMSGVNLINLDKWREHNVTENYLLLMKKFKFKDELSLRAAAFPLSLLSFQHLIYPLDEKLTLAGLGYDYGIDEVVARRSASLHYNGNMKPWL E | |||
| Full Sequence |
|---|
| Protein Sequence Length: 628 Download |
| MKAQPLLPAA LKRRRGPRVA VLALVLCSLL VPLAFLFDRA PSGYVTTEER HRQEVVLPKF 60 DHEEKRRPTG ADSGKRQEAL EKIIPRSRSG VIHQQTPEKN ISKGSTGVIH HQTPEKNISK 120 VLPAPKVEPS KDVTDSTKVA KDASQEGEKA DEVEKAKSCQ LEFGSYCLWS IEHKEIMKDH 180 IVKRLKDQLF VARSYYPSIA KLQGQEALTQ EMKQNIQDHE RILSVSTVDA DLPSFISKRM 240 KQMERTIVRA KSCTVDCKNV DRKLRQILDM TEDEAHFHMK QSAFLYNLGA QTLPKSHHCL 300 SMRLTLEYFK SSSLDSDDSP GKFSSPEYRH YVILSRNVLA ASVVINSTVS SSKEPGHLAF 360 HILTDAQNYY AMKHWFARNS YKNAATQVIN YEAIILEKLP KYTIRQLYLP EEFRVLIRSI 420 KQPTENTRMK YLSLFSHSHF VIPEIFKYLN KVVVLDDDVV VQRDLSFLWN IDMGDKVNGA 480 VELCGLKLGE MKNVLGKTAY DPNLCAWMSG VNLINLDKWR EHNVTENYLL LMKKFKFKDE 540 LSLRAAAFPL SLLSFQHLIY PLDEKLTLAG LGYDYGIDEV VARRSASLHY NGNMKPWLEL 600 GIPDYKKYWK RFLVRGDRFM DECNVNP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd06429 | GT8_like_1 | 2.0e-80 | 330 | 614 | 285 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. | ||
| PLN02718 | PLN02718 | 4.0e-86 | 175 | 625 | 467 | + Probable galacturonosyltransferase | ||
| PLN02910 | PLN02910 | 4.0e-87 | 145 | 626 | 507 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| PLN02829 | PLN02829 | 4.0e-99 | 176 | 627 | 467 | + Probable galacturonosyltransferase | ||
| PLN02769 | PLN02769 | 0 | 1 | 626 | 628 | + Probable galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY89863.1 | 0 | 1 | 625 | 1 | 629 | hypothetical protein OsI_11412 [Oryza sativa Indica Group] |
| GenBank | EEC82698.1 | 0 | 12 | 627 | 15 | 626 | hypothetical protein OsI_27362 [Oryza sativa Indica Group] |
| RefSeq | NP_001050007.1 | 0 | 1 | 627 | 1 | 631 | Os03g0330000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001060656.1 | 0 | 19 | 627 | 21 | 625 | Os07g0681700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002461225.1 | 0 | 1 | 627 | 1 | 627 | hypothetical protein SORBIDRAFT_02g043170 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ss9_A | 0.00003 | 429 | 597 | 76 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1ga8_A | 0.00005 | 429 | 524 | 76 | 169 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1g9r_A | 0.00005 | 429 | 524 | 76 | 169 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
